RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 A0A0U1RQF3 1178 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 RAD1O60671 282 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 BCAS2O75934 225 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 GNB1P62873 340 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 RHDQ02161 417 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 SMAD2Q15796 467 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 TXNRD3NBQ6F5E7 133 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 OR9A2Q8NGT5 310 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 OR52P1PQ8NH57 321 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 HLA-CQ95604 372 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF641Q96N77 438 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 TWNKQ96RR1 684 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 SLC17A9Q9BYT1 436 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 IGSF9Q9P2J2 1179 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 IGKV6D-41A0A0C4DH26 115 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 ATP6V1G1O75348 118 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 UNGP13051 313 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 CLDN2P57739 230 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 ELAVL3Q14576 367 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 OR1S1Q8NH92 325 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 LRFN5Q96NI6 719 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 CXorf49A8MYA2 514 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 FZD9O00144 591 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 NUDT21O43809 227 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 IL3P08700 152 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 PORP16435 677 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 TGM1P22735 817 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 HNRNPH3P31942 346 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 HTD2P86397 168 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 NFATC4Q14934 902 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 AKR1C8PQ5T2L2 129 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 DRICH1Q6PGQ1 229 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 WDR53Q7Z5U6 358 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 KBTBD6Q86V97 674 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 DAZAP1Q96EP5 407 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 THOC3Q96J01 351 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 GATA5Q9BWX5 397 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 TP53BP1Q12888 1972 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 DOT1LQ8TEK3 1739 aa10.69□□□□□ -0.7
PRPF40A-202ENST00000410080 LILRB3O75022 631 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 RGS9O75916 674 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 PROS1P07225 676 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 HOXD8P13378 290 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 FOSL1P15407 271 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 ACTA2P62736 377 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 ACTG2P63267 376 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 MAB21L1Q13394 359 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 GRM7Q14831 915 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 COL28A1Q2UY09 1125 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 IL17FQ96PD4 163 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 ARHGAP39Q9C0H5 1083 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 GPN2Q9H9Y4 310 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 SIT1Q9Y3P8 196 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 C2orf78A6NCI8 922 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 PBX1P40424 430 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 CXCL12P48061 93 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 RAB11BQ15907 218 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 RAB2BQ8WUD1 216 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 CNN2Q99439 309 aaKnown RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 HES7Q9BYE0 225 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 TDRD15B5MCY1 1934 aaKnown RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 NSG1A0A0A6YYJ2 146 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 A0A1W2PQ09 198 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 I3L521 148 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 PRAMEF2O60811 474 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 TOXO94900 526 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 TGFBR3Q03167 851 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 PIGGQ5H8A4 983 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 TRIM73Q86UV7 250 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 CCDC71LQ8N9Z2 235 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 EBF4Q9BQW3 602 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 B4GALT6Q9UBX8 382 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 LSM5Q9Y4Y9 91 aaKnown RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 TSPAN15O95858 294 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 LGALS4P56470 323 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 DNAJC13O75165 2243 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 E9PI62 339 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 PCSK2P16519 638 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 CTXN1P60606 82 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 GRIN2CQ14957 1233 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF630Q2M218 657 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 LIPJQ5W064 366 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 FBXW12Q6X9E4 464 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 C9orf43Q8TAL5 461 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 NKD2Q969F2 451 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 SLC30A2Q9BRI3 323 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 HRASLSQ9HDD0 168 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 MGAT4CQ9UBM8 478 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF223Q9UK11 482 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 ZNF318Q5VUA4 2279 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 SULT2B1O00204 365 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 DRD1P21728 446 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 CSNK2A1P68400 391 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 FAM160A2Q8N612 972 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 CSNK2A3Q8NEV1 391 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 SLC35F5Q8WV83 523 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 CIDECQ96AQ7 238 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 C7orf26Q96N11 449 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 NANOGQ9H9S0 305 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 C17orf105B2RV13 164 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms