RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PRKAG1P54619 331 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 FOXO1Q12778 655 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 GAB1Q13480 694 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 MFSD12Q6NUT3 480 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 SIAH3Q8IW03 269 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 FAM98AQ8NCA5 519 aaKnown RBP20.55■□□□□ 0.88
PTCD3-203ENST00000409783 GLB1L3Q8NCI6 653 aaPredicted RBP20.55■□□□□ 0.88
PTCD3-203ENST00000409783 GALNT11Q8NCW6 608 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 SLC35A4Q96G79 324 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 C16orf58Q96GQ5 468 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 SECISBP2Q96T21 854 aaKnown RBP20.55■□□□□ 0.88
PTCD3-203ENST00000409783 NPHS2Q9NP85 383 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 EQTNQ9NQ60 294 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 ZCCHC3Q9NUD5 404 aaKnown RBP20.55■□□□□ 0.88
PTCD3-203ENST00000409783 CNIH4Q9P003 139 aa20.55■□□□□ 0.88
PTCD3-203ENST00000409783 RP1L1Q8IWN7 2480 aaPredicted RBP20.54■□□□□ 0.88
PTCD3-203ENST00000409783 ZGRF1Q86YA3 2104 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 ANKRD33BA6NCL7 494 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 TTC36A6NLP5 189 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 UGT2B11O75310 529 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 SLC22A3O75751 556 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 NKX2-2O95096 273 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 CBX6O95503 412 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 P04436 131 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 ACP2P11117 423 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 S100A3P33764 101 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 DNASE1L1P49184 302 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 CCT3P49368 545 aaKnown RBP20.54■□□□□ 0.88
PTCD3-203ENST00000409783 PSPHP78330 225 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 PRR5P85299 388 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 ANXA8L1Q5VT79 327 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 PRAMEF20Q5VT98 475 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 CGB2Q6NT52 195 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 NUP54Q7Z3B4 507 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 ANKRD46Q86W74 232 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 POGLUT1Q8NBL1 392 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 OR9I1Q8NGQ6 314 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 SFXN5Q8TD22 340 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 FAM173AQ9BQD7 235 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 FGFR1OP2Q9NVK5 253 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 GPATCH2Q9NW75 528 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 FAM120CQ9NX05 1096 aaKnown RBP20.54■□□□□ 0.88
PTCD3-203ENST00000409783 DCTN4Q9UJW0 460 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 SNX8Q9Y5X2 465 aa20.54■□□□□ 0.88
PTCD3-203ENST00000409783 OR6C70A6NIJ9 312 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 TP53I11O14683 189 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 CFLARO15519 480 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 HMGN2P05204 90 aaKnown RBP20.53■□□□□ 0.88
PTCD3-203ENST00000409783 PGRP06401 933 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 RFC3P40938 356 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 CYP27C1Q4G0S4 372 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 BICRALQ6AI39 1079 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 TMEM81Q6P7N7 255 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 ZCCHC12Q6PEW1 402 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 PAOXQ6QHF9 649 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 CDRT4Q8N9R6 151 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 SLC16A11Q8NCK7 471 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 CCDC115Q96NT0 180 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 NODALQ96S42 347 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 SIKE1Q9BRV8 207 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 TUBA8Q9NY65 449 aaPredicted RBP20.53■□□□□ 0.88
PTCD3-203ENST00000409783 BTNL2Q9UIR0 455 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 NCKAP5O14513 1909 aa20.53■□□□□ 0.88
PTCD3-203ENST00000409783 GXYLT2A0PJZ3 443 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 REM1O75628 298 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 GLSO94925 669 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-203ENST00000409783 EDN3P14138 238 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 GABRA3P34903 492 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 PTGDSP41222 190 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 CASP3P42574 277 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 ZNHIT3Q15649 155 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-203ENST00000409783 SZRD1Q7Z422 152 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 MIER2Q8N344 545 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 ST6GALNAC3Q8NDV1 305 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 OR56A1Q8NGH5 318 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 GOT1L1Q8NHS2 421 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-203ENST00000409783 RNF138Q8WVD3 245 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 DIO2Q92813 273 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 MOAP1Q96BY2 351 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 COL21A1Q96P44 957 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 ZNF317Q96PQ6 595 aaPredicted RBP20.52■□□□□ 0.88
PTCD3-203ENST00000409783 ZBTB18Q99592 522 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 ANGPTL4Q9BY76 406 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 Q9N2J8 555 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 CBLCQ9ULV8 474 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 OR10H1Q9Y4A9 318 aa20.52■□□□□ 0.88
PTCD3-203ENST00000409783 ESPL1Q14674 2120 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 UBR5O95071 2799 aaPredicted RBP20.51■□□□□ 0.87
PTCD3-203ENST00000409783 WISP1O95388 367 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 CPSF4O95639 269 aaKnown RBP20.51■□□□□ 0.87
PTCD3-203ENST00000409783 ZNF24P17028 368 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 UQCRFS1P47985 274 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 MAN2A2P49641 1150 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 PNLIPRP2P54317 469 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 ALDH6A1Q02252 535 aaKnown RBP20.51■□□□□ 0.87
PTCD3-203ENST00000409783 MRPL49Q13405 166 aaKnown RBP20.51■□□□□ 0.87
PTCD3-203ENST00000409783 LASP1Q14847 261 aaKnown RBP20.51■□□□□ 0.87
PTCD3-203ENST00000409783 DUSP5Q16690 384 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 GK5Q6ZS86 529 aa20.51■□□□□ 0.87
PTCD3-203ENST00000409783 FUNDC1Q8IVP5 155 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms