RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 AP3B1O00203 1094 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 RIPK2O43353 540 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 ERLIN1O75477 346 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 NEBLO76041 1014 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 PGLSO95336 258 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 PIGNO95427 931 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 POP4O95707 220 aaKnown RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 TTC4O95801 387 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 TSHBP01222 138 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 FGF1P05230 155 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 H1F0P07305 194 aaKnown RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 ABHD2P08910 425 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 NUDT17P0C025 328 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 ERVK-10P10266 1014 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 HLA-EP13747 358 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 PORP16435 677 aaPredicted RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 HLA-DPA1P20036 260 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 PSMA3P25788 255 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 HSD17B3P37058 310 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 NNMTP40261 264 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 ELK3P41970 407 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 MAGEA4P43358 317 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 TNFRSF4P43489 277 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 NPY2RP49146 381 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 CCNHP51946 323 aaPredicted RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 GPX6P59796 221 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 RPL26P61254 145 aaKnown RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 SARNPP82979 210 aaKnown RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 PPP2R2BQ00005 443 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 CDH17Q12864 832 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 PDIA2Q13087 525 aaKnown RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 CASP8Q14790 479 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 SLMAPQ14BN4 828 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 PON2Q15165 354 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 SLC1A5Q15758 541 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 CDKN3Q16667 212 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 HNRNPA1L2Q32P51 320 aaKnown RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 FAM98BQ52LJ0 330 aaKnown RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 C9orf64Q5T6V5 341 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 STEAP4Q687X5 459 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 CEACAM20Q6UY09 585 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 CYS1Q717R9 158 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 CENPUQ71F23 418 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 TRMT10CQ7L0Y3 403 aaKnown RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 DGLUCYQ7Z3D6 616 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 TMEM135Q86UB9 458 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 MYPOPQ86VE0 399 aaPredicted RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 PLD3Q8IV08 490 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 ZBED8Q8IZ13 594 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 IQCKQ8N0W5 287 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 PDIK1LQ8N165 341 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 STPG4Q8N801 248 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 FBXO36Q8NEA4 188 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 OR2T12Q8NG77 320 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 OR6K2Q8NGY2 324 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 MOSPD2Q8NHP6 518 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 HCAR2Q8TDS4 363 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 PTPMT1Q8WUK0 201 aaPredicted RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 PEX13Q92968 403 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 FAM131CQ96AQ9 280 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 ERLEC1Q96DZ1 483 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 C9orf72Q96LT7 481 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 ZNF354BQ96LW1 612 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 SGK494Q96LW2 274 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 ZNF641Q96N77 438 aaPredicted RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 MCCC1Q96RQ3 725 aaPredicted RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 RANBP9Q96S59 729 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 LYSMD1Q96S90 227 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 GABRG3Q99928 467 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 APOL2Q9BQE5 337 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 FICDQ9BVA6 458 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 KIFC1Q9BW19 673 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 CCDC68Q9H2F9 335 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 MMP27Q9H306 513 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 SCRT2Q9NQ03 307 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 PRSS16Q9NQE7 514 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 TREX1Q9NSU2 369 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 GIMAP4Q9NUV9 329 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 ARGLU1Q9NWB6 273 aaPredicted RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 ADPRHL2Q9NX46 363 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 EURLQ9NYK6 297 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 RPL26L1Q9UNX3 145 aaKnown RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 CHKBQ9Y259 395 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 PPIL1Q9Y3C6 166 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 COL6A3P12111 3177 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 CEP192Q8TEP8 1941 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 A0A0J9YYE9 177 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 A0A1W2PQ67 120 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 hCG_1807616A0A1W2PRN6 198 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 ELOVL7A1L3X0 281 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 MAGEB16A2A368 324 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 HEATR9A2RTY3 570 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 C10orf142B7Z368 130 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 CTDSP2O14595 271 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 ATP8B1O43520 1251 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 SSX4O60224 188 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 SPAG6O75602 509 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 TRBC1P01850 177 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 GSTA2P09210 222 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 LIFP15018 202 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms