RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TMBIM6P55061 237 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 C21orf59P57076 290 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 TAS2R41P59536 307 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 SKP1P63208 163 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 PRICKLE4Q2TBC4 344 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 PGBD2Q6P3X8 592 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 FRRS1Q6ZNA5 592 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 CCDC103Q8IW40 242 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 ARHGEF39Q8N4T4 335 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 ANKRD9Q96BM1 317 aaPredicted RBP19.35■□□□□ 0.69
USP39-203ENST00000409470 ARHGDIGQ99819 225 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 RBCK1Q9BYM8 510 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 PIGUQ9H490 435 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 MTHFD2LQ9H903 347 aaPredicted RBP19.35■□□□□ 0.69
USP39-203ENST00000409470 SOHLH2Q9NX45 425 aa19.35■□□□□ 0.69
USP39-203ENST00000409470 TMEM131Q92545 1883 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 ZAR1LA6NP61 321 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 FRS3O43559 492 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 PLOD3O60568 738 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 FADS2O95864 444 aaKnown RBP19.34■□□□□ 0.69
USP39-203ENST00000409470 ALOX5P09917 674 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 MLLT3P42568 568 aaPredicted RBP19.34■□□□□ 0.69
USP39-203ENST00000409470 CXCL12P48061 93 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 DYNC1I2Q13409 638 aaKnown RBP19.34■□□□□ 0.69
USP39-203ENST00000409470 PRSS48Q7RTY5 328 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 C17orf82Q86X59 251 aaPredicted RBP19.34■□□□□ 0.69
USP39-203ENST00000409470 PEX5LQ8IYB4 626 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 C1orf216Q8TAB5 229 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 CLDN23Q96B33 292 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 UCKL1Q9NWZ5 548 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 MAT2BQ9NZL9 334 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 HCN3Q9P1Z3 774 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 GPR55Q9Y2T6 319 aaPredicted RBP19.34■□□□□ 0.69
USP39-203ENST00000409470 SPAG17Q6Q759 2223 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 RHPN2P1A8MT19 583 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 M0R129 80 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 OR10H2O60403 315 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 MAN1A2O60476 641 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 SOX14O95416 240 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 DCNP07585 359 aaKnown RBP19.34■□□□□ 0.69
USP39-203ENST00000409470 AVPR1BP47901 424 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 GP2P55259 537 aaKnown RBP19.34■□□□□ 0.69
USP39-203ENST00000409470 GFERP55789 205 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 C14orf28Q4W4Y0 310 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 TYW3Q6IPR3 259 aaKnown RBP19.34■□□□□ 0.69
USP39-203ENST00000409470 DHRS4L2Q6PKH6 230 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 COPS4Q9BT78 406 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 PRR14Q9BWN1 585 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 POLR2J3Q9H1A7 115 aaKnown RBP19.34■□□□□ 0.69
USP39-203ENST00000409470 MAN2C1Q9NTJ4 1040 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 REV1Q9UBZ9 1251 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 ZNF232Q9UNY5 417 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 IFT52Q9Y366 437 aa19.34■□□□□ 0.69
USP39-203ENST00000409470 H3BN98 237 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 CNR2P34972 360 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 EXOSC7Q15024 291 aaKnown RBP19.33■□□□□ 0.68
USP39-203ENST00000409470 INAVAQ3KP66 663 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 CCNJQ5T5M9 372 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 OGFOD3Q6PK18 319 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 SDR16C5Q8N3Y7 309 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 LINC00471Q8N535 108 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 CDRT4Q8N9R6 151 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 OR4K5Q8NGD3 323 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 ZNF675Q8TD23 568 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 RAB2BQ8WUD1 216 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 SDF2Q99470 211 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 AMBNQ9NP70 447 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 C11orf16Q9NQ32 467 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 PLCXD1Q9NUJ7 323 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 ZNF443Q9Y2A4 671 aaPredicted RBP19.33■□□□□ 0.68
USP39-203ENST00000409470 CEP192Q8TEP8 1941 aa19.33■□□□□ 0.68
USP39-203ENST00000409470 MED26O95402 600 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 CT62P0C5K7 136 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 CCNYL3P0C7X3 344 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 SLC35E2P0CK97 266 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 RNH1P13489 461 aaKnown RBP19.32■□□□□ 0.68
USP39-203ENST00000409470 GABRB1P18505 474 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 ALDH4A1P30038 563 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 IFNA8P32881 189 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 NUDT6P53370 316 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 TEKQ02763 1124 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 ZP2Q05996 745 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 SLC13A2Q13183 592 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 ILKQ13418 452 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 LARS2Q15031 903 aaKnown RBP19.32■□□□□ 0.68
USP39-203ENST00000409470 GPR68Q15743 365 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 PTCHD4Q6ZW05 846 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 CLIP4Q8N3C7 705 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 COX18Q8N8Q8 333 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 NR4A3Q92570 626 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 FUNDC2Q9BWH2 189 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 KLHL3Q9UH77 587 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 PSORS1C1Q9UIG5 152 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 PLCL2Q9UPR0 1127 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 CHST2Q9Y4C5 530 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 TLCD2A6NGC4 264 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 CPSF4LA6NMK7 179 aaKnown RBP19.32■□□□□ 0.68
USP39-203ENST00000409470 MPZL2O60487 215 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 PIAS2O75928 621 aa19.32■□□□□ 0.68
USP39-203ENST00000409470 CCNA2P20248 432 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms