RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TDGF1P3P51864 188 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 PRKAG1P54619 331 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 HBA1P69905 142 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 RPP38P78345 283 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 PHC1P78364 1004 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 VPS26BQ4G0F5 336 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 SPANXN4Q5MJ08 99 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 NUP54Q7Z3B4 507 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 SZRD1Q7Z422 152 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 SIAH3Q8IW03 269 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 SPPL2AQ8TCT8 520 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 DIO2Q92813 273 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 ZBTB18Q99592 522 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 EBF4Q9BQW3 602 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 CCDC28BQ9BUN5 200 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 CXorf36Q9H7Y0 433 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 Q9N2J8 555 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 ZCCHC3Q9NUD5 404 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 TENM4Q6N022 2769 aa18.24■□□□□ 0.51
PDLIM2-207ENST00000409417 NUP214P35658 2090 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 PINLYPA6NC86 204 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 ANKUB1A6NFN9 424 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 OR6C70A6NIJ9 312 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 REM1O75628 298 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 SLC22A3O75751 556 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 IL12AP29459 219 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 S100A3P33764 101 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 MAP3K8P41279 467 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 CCT3P49368 545 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 FOXO1Q12778 655 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 GAB1Q13480 694 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 TBCELQ5QJ74 424 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 PRAMEF20Q5VT98 475 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 MFSD12Q6NUT3 480 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 ZCCHC12Q6PEW1 402 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 WDR53Q7Z5U6 358 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 CDRT4Q8N9R6 151 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 OR4N2Q8NGD1 307 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 OR56A1Q8NGH5 318 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 STON2Q8WXE9 905 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 HGDQ93099 445 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 MOAP1Q96BY2 351 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 SLC35A4Q96G79 324 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 MARK4Q96L34 752 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 COL21A1Q96P44 957 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 SIKE1Q9BRV8 207 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 PROK2Q9HC23 129 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 ZIM2Q9NZV7 527 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 PCDHGB4Q9UN71 923 aa18.23■□□□□ 0.51
PDLIM2-207ENST00000409417 DYNC1I1O14576 645 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 UGT2B11O75310 529 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 GNLYP22749 145 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 KRT20P35900 424 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 RFC3P40938 356 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 DNASE1L1P49184 302 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 KCNJ2P63252 427 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 GUCY1A3Q02108 690 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 SPDYE7PQ495Y7 208 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 KRTCAP3Q53RY4 240 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 CLECL1Q8IZS7 167 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 SFXN5Q8TD22 340 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 FAM120CQ9NX05 1096 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 CBLCQ9ULV8 474 aa18.22■□□□□ 0.51
PDLIM2-207ENST00000409417 C9JVG2 144 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 TSPAN2O60636 221 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 GLSO94925 669 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 NKX2-2O95096 273 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 HMGN2P05204 90 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 PGRP06401 933 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 GABRA3P34903 492 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 CASP3P42574 277 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 UQCRFS1P47985 274 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 MRPL19P49406 292 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 DGKQP52824 942 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 PNLIPRP2P54317 469 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 MRPL49Q13405 166 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 EFR3AQ14156 821 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 ELOAQ14241 798 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 DECR1Q16698 335 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 EXOSC6Q5RKV6 272 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 TMEM81Q6P7N7 255 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 BHLHB9Q6PI77 547 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 SLC22A16Q86VW1 577 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 ANKRD46Q86W74 232 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 MIER2Q8N344 545 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 TMCO6Q96DC7 493 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 C16orf58Q96GQ5 468 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 GPR137Q96N19 417 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 ADOQ96SZ5 270 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 DOHHQ9BU89 302 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 ANGPTL4Q9BY76 406 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 TTTY12Q9BZ98 90 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 TSPAN10Q9H1Z9 355 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 CCDC134Q9H6E4 229 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 IL1RL2Q9HB29 575 aa18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-207ENST00000409417 NPIPA5E9PKD4 350 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 TFECO14948 347 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 WISP2O76076 250 aa18.2■□□□□ 0.5
PDLIM2-207ENST00000409417 SNX4O95219 450 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms