RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 VILLO15195 856 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 MED26O95402 600 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 GKN3PP0CG01 181 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 PRR23D2P0DMB1 279 aaPredicted RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 MAOAP21397 527 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 PSMA1P25786 263 aaKnown RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 CD1CP29017 333 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 SLC5A2P31639 672 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 GCGRP47871 477 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 NKAIN1Q4KMZ8 207 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 SPANXN2Q5MJ10 180 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 RAET1LQ5VY80 246 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 DGLUCYQ7Z3D6 616 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 ABI3BPQ7Z7G0 1075 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 LINC01555Q8NAE3 123 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 PROKR2Q8NFJ6 384 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 SPRTNQ9H040 489 aaPredicted RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 ANKRA2Q9H9E1 313 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 RSL24D1Q9UHA3 163 aaKnown RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 ADAM30Q9UKF2 790 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 SH2B3Q9UQQ2 575 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 CACNA1CQ13936 2221 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 DAPL1A0PJW8 107 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 A6NL46 340 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 JRKO75564 520 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 OR5F1O95221 314 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 EFEMP2O95967 443 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 P04436 131 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 SLC6A6P31641 620 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 TSFMP43897 325 aaKnown RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 CDH11P55287 796 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 LIM2P55344 173 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 NXPH1P58417 271 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 CHRNEQ04844 493 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 TMEM44Q2T9K0 475 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 MANEAQ5SRI9 462 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 FRMPD2BQ6IN97 320 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 PAPD4Q6PIY7 484 aaKnown RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 KCTD8Q6ZWB6 473 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 UBQLNLQ8IYU4 475 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 HS3ST5Q8IZT8 346 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 ZNF619Q8N2I2 560 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 SFXN5Q8TD22 340 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 ZFP90Q8TF47 636 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 ZNF300Q96RE9 604 aaPredicted RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 NRTNQ99748 197 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 CHCHD6Q9BRQ6 235 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 POLR2J2Q9GZM3 115 aaKnown RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 QRSL1Q9H0R6 528 aaKnown RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 SEC61A2Q9H9S3 476 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 RIMS3Q9UJD0 308 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 PADI1Q9ULC6 663 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 A0A1B0GX78 115 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 NPIPA5E9PKD4 350 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 DCTP40126 519 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 TLR1Q15399 786 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 MAPK11Q15759 364 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 NPTX1Q15818 432 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 RNF220Q5VTB9 566 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 PGM2L1Q6PCE3 622 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 TMEM64Q6YI46 380 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 B3GNT6Q6ZMB0 384 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 LAPTM4BQ86VI4 370 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 RAB43Q86YS6 212 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 NRMQ8IXM6 262 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 SLC5A8Q8N695 610 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 METTL25Q8N6Q8 603 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 OR6N1Q8NGY5 312 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 S100A13Q99584 98 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 ARHGAP9Q9BRR9 750 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 CXorf21Q9HAI6 301 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 FSCN3Q9NQT6 498 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 ASIC5Q9NY37 505 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 POMT2Q9UKY4 750 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 NPIPA1Q9UND3 350 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 MRPS7Q9Y2R9 242 aaKnown RBP8.53□□□□□ -1.04
LIG4-202ENST00000405925 RALGAPA2Q2PPJ7 1873 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 CROCCQ5TZA2 2017 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 TRBV11-1A0A0K0K1C0 115 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 TRAPPC13A5PLN9 417 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 LILRA5A6NI73 299 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 CTNSO60931 367 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 ADORA3P0DMS8 318 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 MYL9P24844 172 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 SSTR4P31391 388 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 GPR143P51810 404 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 PMS2P3Q13401 168 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 KLHL22Q53GT1 634 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 COX20Q5RI15 118 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 TPRG1LQ5T0D9 272 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 LCN1P1Q5VSP4 162 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 SLC27A4Q6P1M0 643 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 KLHL24Q6TFL4 600 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 OLIG3Q7RTU3 272 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 TMEM151AQ8N4L1 468 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 FANK1Q8TC84 345 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 SLC38A5Q8WUX1 472 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 OSTF1Q92882 214 aa8.53□□□□□ -1.04
LIG4-202ENST00000405925 POLDIP3Q9BY77 421 aaKnown RBP8.53□□□□□ -1.04
LIG4-202ENST00000405925 HOXD1Q9GZZ0 328 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms