RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TESK2Q96S53 571 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 TSPAN18Q96SJ8 248 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ATOH8Q96SQ7 321 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 TTYH2Q9BSA4 534 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 RPP25Q9BUL9 199 aaKnown RBP3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZNF416Q9BWM5 594 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ERVK-6Q9BXR3 956 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 TRPV5Q9NQA5 729 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 CENPMQ9NSP4 180 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 DUS2Q9NX74 493 aaKnown RBP3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 TMOD2Q9NZR1 351 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 DHRS4-AS1Q9P1J3 65 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 MLXQ9UH92 298 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 ATP6V1HQ9UI12 483 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 MFHAS1Q9Y4C4 1052 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 U3KQV3 271 aa3.1□□□□□ -1.91
HMGB1P17-201ENST00000403495 A0A1B0GU03 582 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 A0A1B0GUL7 405 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 A0A1W2PPR1 153 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 MFSD2BA6NFX1 497 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 ACOD1A6NK06 481 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 LRRC30A6NM36 301 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 FOXI3A8MTJ6 420 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 E9PMD0 336 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 SGK494L7N484 410 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 SAP18O00422 153 aaKnown RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 ALOX15BO15296 676 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 GALR3O60755 368 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 TOXO94900 526 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 TBX6O95947 436 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 RENP00797 406 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 IGHV3-9P01782 118 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 MELTFP08582 738 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 SLC35G4P0C7Q5 338 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 CALCBP10092 127 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 PAX7P23759 505 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 ACAA2P42765 397 aaKnown RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 IST1P53990 364 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 PPIAP62937 165 aaKnown RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 CHI3L2Q15782 390 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 SHROOM1Q2M3G4 852 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZNF506Q5JVG8 444 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 TAF3Q5VWG9 929 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 SLX4IPQ5VYV7 408 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 REP15Q6BDI9 236 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 PRR5LQ6MZQ0 368 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 SLC25A24Q6NUK1 477 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 GCNT2Q8N0V5 402 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 TEX9Q8N6V9 391 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 CRYGNQ8WXF5 182 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 HPDLQ96IR7 371 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 C4orf36Q96KX1 117 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 VSTM2LQ96N03 204 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 FAM173AQ9BQD7 235 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 WRAP53Q9BUR4 548 aaKnown RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 GSDMCQ9BYG8 508 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 VPS33BQ9H267 617 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 RHOJQ9H4E5 214 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 RPAP3Q9H6T3 665 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 GPN2Q9H9Y4 310 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 RBM28Q9NW13 759 aaKnown RBP3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 PRODH2Q9UF12 536 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 KLK13Q9UKR3 277 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 RNF24Q9Y225 148 aa3.09□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZNF253O75346 499 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 TM7SF2O76062 418 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 IGHV3-13P01766 116 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 HSPA5P11021 654 aaKnown RBP3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 EPB41P11171 864 aaKnown RBP3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 ARHGDIAP52565 204 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZFP36L1Q07352 338 aaKnown RBP3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 EIF2B1Q14232 305 aaKnown RBP3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 SLC10A1Q14973 349 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 UBE2V2Q15819 145 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 CAMK4Q16566 473 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 CDKN3Q16667 212 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 C17orf58Q2M2W7 97 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 CNPY1Q3B7I2 92 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 MS4A13Q5J8X5 152 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 LINC00242Q5T6M2 205 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 STXBP4Q6ZWJ1 553 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 NET1Q7Z628 596 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 NAXDQ8IW45 347 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 MAPK1IP1LQ8NDC0 245 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 C17orf47Q8NEP4 570 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 IPMKQ8NFU5 416 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 RFESDQ8TAC1 157 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 FLVCR1-AS1Q8TAF5 88 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 GIPC3Q8TF64 312 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 PIWIL1Q96J94 861 aaKnown RBP3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 VPS35Q96QK1 796 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 RBM4BQ9BQ04 359 aaKnown RBP3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 TBCDQ9BTW9 1192 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 RBM24Q9BX46 236 aaKnown RBP3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 ABCC13Q9NSE7 274 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 AGPAT5Q9NUQ2 364 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 LAMP5Q9UJQ1 280 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 CHMP2BQ9UQN3 213 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 ATP6V0A2Q9Y487 856 aa3.08□□□□□ -1.92
HMGB1P17-201ENST00000403495 TRAV9-2A0A087WT02 112 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms