RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 DPP4P27487 766 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PIK3R1P27986 724 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 SERPINB1P30740 379 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 GPX6P59796 221 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 POU4F1Q01851 419 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 MAP4K2Q12851 820 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CHRFAM7AQ494W8 412 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OR2A2Q6IF42 318 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 AAGABQ6PD74 315 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 NPSR1Q6W5P4 371 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TEX9Q8N6V9 391 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TRIM58Q8NG06 486 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OR4K14Q8NGD5 310 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ZBED6CLQ96FA7 236 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PINK1Q9BXM7 581 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 DDX47Q9H0S4 455 aaKnown RBP10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 FLRT3Q9NZU0 649 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ASIC3Q9UHC3 531 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 GDF2Q9UK05 429 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CLEC4AQ9UMR7 237 aa10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 MAGED1Q9Y5V3 778 aaPredicted RBP10.67□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OR6C70A6NIJ9 312 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 A8MV72 311 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 EFCAB8A8MWE9 144 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 H0YIV9 168 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TMCC2O75069 709 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TNFRSF21O75509 655 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 FAM157CP0CG43 387 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CT45A8P0DMV1 189 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CT45A9P0DMV2 189 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PORP16435 677 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PCSK2P16519 638 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PTMSP20962 102 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 GRK2P25098 689 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PTX3P26022 381 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 GCKP35557 465 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 FEN1P39748 380 aaKnown RBP10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ARFIP1P53367 373 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CORO7P57737 925 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ATP6V0D1P61421 351 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 RPS4XP62701 263 aaKnown RBP10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 MRPS35P82673 323 aaKnown RBP10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CUL3Q13618 768 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PON3Q15166 354 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PPP1R7Q15435 360 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CTU2Q2VPK5 515 aaKnown RBP10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CT45A2Q5DJT8 189 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 C6orf52Q5T4I8 152 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CYP20A1Q6UW02 462 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 WFDC8Q8IUA0 241 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PDIK1LQ8N165 341 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 FADS6Q8N9I5 356 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 FBXO36Q8NEA4 188 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OR52R1Q8NGF1 315 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 COL21A1Q96P44 957 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ADOQ96SZ5 270 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 GPR22Q99680 433 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 C19orf24Q9BVV8 132 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 BRINP2Q9C0B6 783 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PRM3Q9NNZ6 103 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OPTCQ9UBM4 332 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 BCAP29Q9UHQ4 241 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PROCRQ9UNN8 238 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 GPR55Q9Y2T6 319 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 RNF11Q9Y3C5 154 aa10.66□□□□□ -0.7
SPTLC1P3-201ENST00000403408 IGHV4-30-2A0A087WSY4 118 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OR2M5A3KFT3 312 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 SHISA8B8ZZ34 492 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 E7ESA3 106 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PGRMC1O00264 195 aaKnown RBP10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ACOX3O15254 700 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 SEC14L5O43304 696 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 TP53P04637 393 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 KLK1P06870 262 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PEPDP12955 493 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 DRD5P21918 477 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 IDUAP35475 653 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PPICP45877 212 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CPSF6Q16630 551 aaKnown RBP eCLIP10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PGGHGQ32M88 737 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ADAM5Q6NVV9 412 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 SEZ6L2Q6UXD5 910 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 FAM214BQ7L5A3 538 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 CMC1Q7Z7K0 106 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 NUDT13Q86X67 352 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 MYLK4Q86YV6 388 aaPredicted RBP10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OR2M3Q8NG83 312 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 OR4N2Q8NGD1 307 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 SLC35A4Q96G79 324 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PBKQ96KB5 322 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 ZNF681Q96N22 645 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 NPAS1Q99742 590 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 DSN1Q9H410 356 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 WDR41Q9HAD4 459 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PLSCR4Q9NRQ2 329 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 NUDT4Q9NZJ9 180 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 DKKL1Q9UK85 242 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 LIPT1Q9Y234 373 aa10.65□□□□□ -0.7
SPTLC1P3-201ENST00000403408 PCDHA9Q9Y5H5 950 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms