RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 PHF19Q5T6S3 580 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 ARHGAP40Q5TG30 622 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 TCTN3Q6NUS6 607 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 FRRS1Q6ZNA5 592 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 QSOX2Q6ZRP7 698 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 HMGN2P46Q86SG4 172 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 C7orf57Q8NEG2 295 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 OR4D11Q8NGI4 311 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 GPR151Q8TDV0 419 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 CYGBQ8WWM9 190 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 PIK3R3Q92569 461 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 QRSL1Q9H0R6 528 aaKnown RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 SIDT1Q9NXL6 827 aaKnown RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 MKLN1Q9UL63 735 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 SATB2Q9UPW6 733 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 WDR45Q9Y484 360 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 PCDHGB5Q9Y5G0 923 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 MYO15AQ9UKN7 3530 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 EIF4E1BA6NMX2 242 aaKnown RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 D6RAR5 112 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 H0YAE9 185 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 FLRT2O43155 660 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 EPPINO95925 133 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 ALBP02768 609 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 ACP1P24666 158 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 DAPP51397 102 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 CHN2P52757 468 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 SPIBQ01892 262 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 TRA2AQ13595 282 aaKnown RBP eCLIP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 MINDY4Q4G0A6 757 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 DCST2Q5T1A1 773 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 MFSD4BQ5TF39 518 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 TYW3Q6IPR3 259 aaKnown RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 PWWP2BQ6NUJ5 590 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 ZNF605Q86T29 641 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 COMTD1Q86VU5 262 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 CYP4Z1Q86W10 505 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 RBM45Q8IUH3 476 aaKnown RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 COX18Q8N8Q8 333 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 OR4C15Q8NGM1 316 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 OR52P1PQ8NH57 321 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 VANGL1Q8TAA9 524 aaPredicted RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 WFDC6Q9BQY6 131 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 LMF2Q9BU23 707 aaKnown RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 SAP130Q9H0E3 1048 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 SOX17Q9H6I2 414 aaPredicted RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 FOLH1BQ9HBA9 442 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 MKKSQ9NPJ1 570 aaPredicted RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 ACER3Q9NUN7 267 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 TMEFF2Q9UIK5 374 aaPredicted RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 IFT52Q9Y366 437 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 HEMK1Q9Y5R4 338 aaPredicted RBP12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 DMDP11532 3685 aa12.38□□□□□ -0.43
CEACAM1-206ENST00000403136 VPS13AQ96RL7 3174 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 IGKV3D-11A0A0A0MRZ8 115 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 SYT5O00445 386 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 FFAR1O14842 300 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 STX11O75558 287 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 SCRG1O75711 98 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 TIAF1O95411 115 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 AK1P00568 194 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 GP1BAP07359 652 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 MYF6P23409 242 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 CSTF2P33240 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 PGDP52209 483 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 RAD23AP54725 363 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 CDH12P55289 794 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 POU6F2P78424 691 aaPredicted RBP12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 RHAGQ02094 409 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 ZFP36L1Q07352 338 aaKnown RBP12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 ZNF155Q12901 538 aaPredicted RBP12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 EPS8Q12929 822 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 RFX4Q33E94 735 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 CCNJQ5T5M9 372 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 AP1ARQ63HQ0 302 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 KDM4DQ6B0I6 523 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 LAIR1Q6GTX8 287 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 BPHLQ86WA6 291 aaPredicted RBP12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 VRK2Q86Y07 508 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 LACC1Q8IV20 430 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 SLC38A9Q8NBW4 561 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 OR52J3Q8NH60 311 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 GIPC3Q8TF64 312 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 PTPMT1Q8WUK0 201 aaPredicted RBP12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 VSTM2LQ96N03 204 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 CNPPD1Q9BV87 410 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 ZNF350Q9GZX5 532 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 TOR3AQ9H497 397 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 TRIM45Q9H8W5 580 aaPredicted RBP12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 SLC22A11Q9NSA0 550 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 OCIAD1Q9NX40 245 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 C3orf18Q9UK00 162 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 ZNF232Q9UNY5 417 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 ERVK-19Q9WJR5 959 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 SLC9A8Q9Y2E8 581 aa12.37□□□□□ -0.43
CEACAM1-206ENST00000403136 GXYLT2A0PJZ3 443 aa12.36□□□□□ -0.43
CEACAM1-206ENST00000403136 C17orf105B2RV13 164 aa12.36□□□□□ -0.43
CEACAM1-206ENST00000403136 PRAMEF2O60811 474 aa12.36□□□□□ -0.43
CEACAM1-206ENST00000403136 SEMA7AO75326 666 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms