RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 LGI1O95970 557 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 SSTR4P31391 388 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 HPCAP84074 193 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 ACY1Q03154 408 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 EXOC3L2Q2M3D2 409 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 VRK2Q86Y07 508 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 OR52J3Q8NH60 311 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 PIK3R3Q92569 461 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 DPYSL5Q9BPU6 564 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 ZNF304Q9HCX3 659 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 MKLN1Q9UL63 735 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 SATB2Q9UPW6 733 aa23.88■■□□□ 1.41
CPNE1-205ENST00000401607 FBLP22087 321 aaKnown RBP23.87■■□□□ 1.41
CPNE1-205ENST00000401607 HMGA2P52926 109 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 RAD23AP54725 363 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 SERTAD2Q14140 314 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 RFX4Q33E94 735 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 ZNF311Q5JNZ3 666 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 CCNJQ5T5M9 372 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 C1orf189Q5VU69 101 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 PRR23CQ6ZRP0 262 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 ZNF350Q9GZX5 532 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 ZNF696Q9H7X3 374 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 RHCGQ9UBD6 479 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 WDR45Q9Y484 360 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 CHST2Q9Y4C5 530 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 MMACHCQ9Y4U1 282 aa23.87■■□□□ 1.41
CPNE1-205ENST00000401607 MYO15AQ9UKN7 3530 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 TNFAIP8O95379 198 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 EMDP50402 254 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 ZNF155Q12901 538 aaPredicted RBP23.86■■□□□ 1.41
CPNE1-205ENST00000401607 DCST2Q5T1A1 773 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 DEF8Q6ZN54 512 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 GALNT5Q7Z7M9 940 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 GIPC3Q8TF64 312 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 LOXL4Q96JB6 756 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 KMT2EQ8IZD2 1858 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 AGRPO00253 132 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 NKX2-2O95096 273 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 GADD45GO95257 159 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 POLR2IP36954 125 aaKnown RBP23.86■■□□□ 1.41
CPNE1-205ENST00000401607 DUSP3P51452 185 aaPredicted RBP23.86■■□□□ 1.41
CPNE1-205ENST00000401607 ZNF267Q14586 743 aaPredicted RBP23.86■■□□□ 1.41
CPNE1-205ENST00000401607 COX18Q8N8Q8 333 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 ATG16L2Q8NAA4 619 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 GPR151Q8TDV0 419 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 CNDP2Q96KP4 475 aaKnown RBP23.86■■□□□ 1.41
CPNE1-205ENST00000401607 PTCHD1Q96NR3 888 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 OR6C1Q96RD1 312 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 LMF2Q9BU23 707 aaKnown RBP23.86■■□□□ 1.41
CPNE1-205ENST00000401607 FOLH1BQ9HBA9 442 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 ACAD8Q9UKU7 415 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 ORC6Q9Y5N6 252 aa23.86■■□□□ 1.41
CPNE1-205ENST00000401607 BDP1A6H8Y1 2624 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 NCOR1O75376 2440 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 NUP210LQ5VU65 1888 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 SYT5O00445 386 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 GALNSP34059 522 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 GABRA3P34903 492 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 EFNA3P52797 238 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 MICAQ29983 383 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 TTC23Q5W5X9 447 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 ZC3H14Q6PJT7 736 aaKnown RBP23.85■■□□□ 1.41
CPNE1-205ENST00000401607 QSOX2Q6ZRP7 698 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 PIK3C3Q8NEB9 887 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 OR10G2Q8NGC3 310 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 OR6T1Q8NGN1 323 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 OR52P1PQ8NH57 321 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 RNF31Q96EP0 1072 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 DHRS1Q96LJ7 313 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 MUS81Q96NY9 551 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 PELOQ9BRX2 385 aaKnown RBP23.85■■□□□ 1.41
CPNE1-205ENST00000401607 MTHFD2LQ9H903 347 aaPredicted RBP23.85■■□□□ 1.41
CPNE1-205ENST00000401607 FBXO34Q9NWN3 711 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 SIDT1Q9NXL6 827 aaKnown RBP23.85■■□□□ 1.41
CPNE1-205ENST00000401607 KIF17Q9P2E2 1029 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 SLC9A8Q9Y2E8 581 aa23.85■■□□□ 1.41
CPNE1-205ENST00000401607 HEMK1Q9Y5R4 338 aaPredicted RBP23.85■■□□□ 1.41
CPNE1-205ENST00000401607 IGKV3D-11A0A0A0MRZ8 115 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 GXYLT2A0PJZ3 443 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 PCDH17O14917 1159 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 IFNA16P05015 189 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 SMIM18P0DKX4 95 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 PRKAR1BP31321 381 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 PSG6Q00889 435 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 FUT7Q11130 342 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 ARHGAP40Q5TG30 622 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 RHBDD2Q6NTF9 364 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 DHRS4L2Q6PKH6 230 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 SLITRK4Q8IW52 837 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 ARHGDIGQ99819 225 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 CNPPD1Q9BV87 410 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 SAP130Q9H0E3 1048 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 A4GNTQ9UNA3 340 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 SRPK3Q9UPE1 567 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 ERVK-19Q9WJR5 959 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 DTX4Q9Y2E6 619 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 PCDHGA5Q9Y5G8 931 aa23.84■■□□□ 1.41
CPNE1-205ENST00000401607 KHNYNO15037 678 aaKnown RBP23.83■■□□□ 1.41
CPNE1-205ENST00000401607 TIAF1O95411 115 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms