RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 BHLHB9Q6PI77 547 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 IGFL2Q6UWQ7 119 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 LYPD8Q6UX82 237 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 TRPM8Q7Z2W7 1104 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 DHDDSQ86SQ9 333 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 SLC44A2Q8IWA5 706 aaPredicted RBP14.72□□□□□ -0.05
HMGA1-204ENST00000401473 PIK3R3Q92569 461 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 LRRC58Q96CX6 371 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 ACTRT3Q9BYD9 372 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 PLA2G3Q9NZ20 509 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 FAM208BQ5VWN6 2430 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 GXYLT2A0PJZ3 443 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 NKX2-2O95096 273 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 T-ENOLP0DO92 83 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 ABCD3P28288 659 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 PRDX6P30041 224 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 CPA2P48052 419 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 CD97P48960 835 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 DCAF7P61962 342 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 RUNDC3AQ59EK9 446 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 ABHD17BQ5VST6 288 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 DESI1Q6ICB0 168 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 CDC73Q6P1J9 531 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 PRR22Q8IZ63 422 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 JADE3Q92613 823 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 ANKRD27Q96NW4 1050 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 OR7D2Q96RA2 312 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 CGREF1Q99674 301 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 TEKT2Q9UIF3 430 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 CSAG2Q9Y5P2 127 aa14.72□□□□□ -0.05
HMGA1-204ENST00000401473 EXPH5Q8NEV8 1989 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 FRG2CA6NGY1 282 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 MKRN2OSH3BPM6 223 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 TO15178 435 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 WDPCPO95876 746 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 SOX3P41225 446 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 MFAP5Q13361 173 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 KRT72Q14CN4 511 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.71□□□□□ -0.051e-7■■□□□ 13.3
HMGA1-204ENST00000401473 NANOGP8Q6NSW7 305 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 TNFAIP8L2Q6P589 184 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-204ENST00000401473 ANGPTL8Q6UXH0 198 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 ZNF227Q86WZ6 799 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 LGI4Q8N135 537 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 HORMAD2Q8N7B1 307 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 FBXO27Q8NI29 283 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 MIPOL1Q8TD10 442 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 GPR151Q8TDV0 419 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 RAB8BQ92930 207 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 ARHGAP9Q9BRR9 750 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 OR51I1Q9H343 314 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 PIGUQ9H490 435 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 NANOGQ9H9S0 305 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 FAF1Q9UNN5 650 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-204ENST00000401473 NPFFR2Q9Y5X5 522 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 GMEB1Q9Y692 573 aa14.71□□□□□ -0.05
HMGA1-204ENST00000401473 PRAMEF27A3QJZ7 478 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 ERVH48-1M5A8F1 160 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 OR6B1O95007 311 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 OR12D1P0DN82 309 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 CD96P40200 585 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 PRIM2P49643 509 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 KCNAB2Q13303 367 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 LY6DQ14210 128 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 SELPLGQ14242 412 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 TRMT5Q32P41 509 aaKnown RBP14.7□□□□□ -0.06
HMGA1-204ENST00000401473 PCYOX1LQ8NBM8 494 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 DNAJB8Q8NHS0 232 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 ADAMTS15Q8TE58 950 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 HAS2Q92819 552 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 CDS1Q92903 461 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 TMBIM1Q969X1 311 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 HSPBAP1Q96EW2 488 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 SLC35G5Q96KT7 338 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 EFCAB1Q9HAE3 211 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 DUSP22Q9NRW4 184 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 FBXO34Q9NWN3 711 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 TAGLN3Q9UI15 199 aa14.7□□□□□ -0.06
HMGA1-204ENST00000401473 HMGN4O00479 90 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 NPPAP01160 153 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 IGKV1D-16P01601 117 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 ETFAP13804 333 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 TRHRP34981 398 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-204ENST00000401473 SSR4P51571 173 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 MTPNP58546 118 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 RGNQ15493 299 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 ZNHIT3Q15649 155 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-204ENST00000401473 ZNF791Q3KP31 576 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-204ENST00000401473 SPINK14Q6IE38 97 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 IL20RBQ6UXL0 311 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 GALNT10Q86SR1 603 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 CATSPER1Q8NEC5 780 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 XAGE5Q8WWM1 108 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 GIN1Q9NXP7 522 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-204ENST00000401473 PCNX3Q9H6A9 2034 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 ACOX3O15254 700 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 KRT75O95678 551 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 ALOX5P09917 674 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 NUDT7P0C024 238 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms