RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CASP9P55211 416 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 DCAF7P61962 342 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 LRRC74AQ0VAA2 488 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SPDYE7PQ495Y7 208 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 COX20Q5RI15 118 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 C6orf10Q5SRN2 563 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CDC73Q6P1J9 531 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 Q6ZS92 163 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ZNF621Q6ZSS3 439 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 MDGA2Q7Z553 956 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC44A2Q8IWA5 706 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 C10orf111Q8N326 155 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 DPP10Q8N608 796 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 POU5F2Q8N7G0 328 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CDRT4Q8N9R6 151 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OR5D16Q8NGK9 328 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 MIPOL1Q8TD10 442 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PIK3R3Q92569 461 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 MOAP1Q96BY2 351 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC35A4Q96G79 324 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 UBL7Q96S82 380 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 HES7Q9BYE0 225 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC25A18Q9H1K4 315 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 RMND5AQ9H871 391 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SH2D2AQ9NP31 389 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 VAPAQ9P0L0 249 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 LEF1Q9UJU2 399 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 VPS4AQ9UN37 437 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PCDHGB4Q9UN71 923 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 NPFFR2Q9Y5X5 522 aa11.44□□□□□ -0.58
HLA-DQB1-203ENST00000399082 EML6Q6ZMW3 1958 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PRAMEF27A3QJZ7 478 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ADAM10O14672 748 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ACOX3O15254 700 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TSPAN2O60636 221 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 UNC5CO95185 931 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 FUT5Q11128 374 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 NADK2Q4G0N4 442 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 COLEC12Q5KU26 742 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 GKAP1Q5VSY0 366 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 HLA-DQA1Q5Y7H0 255 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 FAM91A1Q658Y4 838 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC6A19Q695T7 634 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 REP15Q6BDI9 236 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SPINK14Q6IE38 97 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ZCCHC12Q6PEW1 402 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 IL20RBQ6UXL0 311 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ZAR1Q86SH2 424 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC34A3Q8N130 599 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC15A4Q8N697 577 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 HORMAD2Q8N7B1 307 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 Q8NA96 180 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC22A8Q8TCC7 542 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PNPT1Q8TCS8 783 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 BCAS4Q8TDM0 211 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ASB15Q8WXK1 588 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC9A6Q92581 669 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CDS1Q92903 461 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 HGDQ93099 445 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TMBIM1Q969X1 311 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 NTNG2Q96CW9 530 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SPACA9Q96E40 222 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OMA1Q96E52 524 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 HSPBAP1Q96EW2 488 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SLC35G5Q96KT7 338 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OR7D2Q96RA2 312 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CPPED1Q9BRF8 314 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 UTP23Q9BRU9 249 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 MFRPQ9BY79 579 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ACTRT3Q9BYD9 372 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 IKZF5Q9H5V7 419 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 MRGBPQ9NV56 204 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 FBXO34Q9NWN3 711 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 NDUFAF1Q9Y375 327 aa11.43□□□□□ -0.58
HLA-DQB1-203ENST00000399082 A0A0G2JMM0 328 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 LOC100653049A0A140TA62 436 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 A0A1W2PPB8 328 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 A0A1W2PRS3 328 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 KIR3DP1A8MWS1 328 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 UGT2B11O75310 529 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PPM1BO75688 479 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 KRT34O76011 436 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ZIC2O95409 532 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CCL3P10147 92 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 COX4I1P13073 169 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 GABRA3P34903 492 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PIGAP37287 484 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CYB561P49447 251 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PRIM2P49643 509 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 FBXW4P57775 412 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 ARG2P78540 354 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 PLCXD2Q0VAA5 305 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 SELPLGQ14242 412 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OR1C1Q15619 314 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 NTRK2Q16620 822 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 COQ5Q5HYK3 327 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 CCNJQ5T5M9 372 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 TNFAIP8L2Q6P589 184 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 OPN5Q6U736 354 aa11.42□□□□□ -0.58
HLA-DQB1-203ENST00000399082 DHDDSQ86SQ9 333 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms