RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 GPR135Q8IZ08 494 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 BMPERQ8N8U9 685 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 DUSP18Q8NEJ0 188 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 TMEM163Q8TC26 289 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 IL17FQ96PD4 163 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 PARK7Q99497 189 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 MRPL9Q9BYD2 267 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 ARHGAP39Q9C0H5 1083 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 MCOLN1Q9GZU1 580 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 PLAGL1Q9UM63 463 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 DIMT1Q9UNQ2 313 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 CSNK1G3Q9Y6M4 447 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 THSD7BQ9C0I4 1608 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 GATBO75879 557 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 RAF1P04049 648 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 DNASE1P24855 282 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 KIAA1841Q6NSI8 718 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 SMARCD3Q6STE5 483 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC51BQ86UW2 128 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 LRRTM4Q86VH4 590 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 COMTD1Q86VU5 262 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 FAM181AQ8N9Y4 354 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 BBS1Q8NFJ9 593 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 SPRYD4Q8WW59 207 aaPredicted RBP9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 UCN3Q969E3 161 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 SECISBP2Q96T21 854 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 GSX2Q9BZM3 304 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 B3GNT4Q9C0J1 378 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 SERHL2Q9H4I8 314 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 DIABLOQ9NR28 239 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 NUP50Q9UKX7 468 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 LGALS8O00214 317 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 RGS11O94810 467 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC2A10O95528 541 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 IGSF6O95976 241 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 TFPIP10646 304 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 SHC1P29353 583 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 CD70P32970 193 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 ETV3P41162 512 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 MAP2K6P52564 334 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 ATP12AP54707 1039 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 CDH11P55287 796 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 KCNA10Q16322 511 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 SPIN4Q56A73 249 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 BICRALQ6AI39 1079 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 MZT2AQ6P582 158 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 TMEM91Q6ZNR0 172 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 KIF18BQ86Y91 864 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 OR51G2Q8NGK0 314 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 OR2T35Q8NGX2 323 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 RFT1Q96AA3 541 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 BHLHE41Q9C0J9 482 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 RNF32Q9H0A6 362 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 GFYI3L273 518 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 SIGLEC5O15389 551 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 HYAL3O43820 417 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 SOD1P00441 154 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 CATP04040 527 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 EIF4EP06730 217 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 LIMS3P0CW19 117 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 LIMS4P0CW20 117 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 ACADMP11310 421 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 ANXA3P12429 323 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 AKR1A1P14550 325 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 IMPA1P29218 277 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC6A11P48066 632 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 AP1S2P56377 157 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 TEKQ02763 1124 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 EEF1A2Q05639 463 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 SIGLEC14Q08ET2 396 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 ANGPT1Q15389 498 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 AANATQ16613 207 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 C12orf73Q69YU5 71 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 SFRP4Q6FHJ7 346 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 FUT10Q6P4F1 479 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 ARL9Q6T311 187 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 LYPD4Q6UWN0 246 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 CFAP77Q6ZQR2 320 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 QSOX2Q6ZRP7 698 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 RNF165Q6ZSG1 346 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 TPRG1Q6ZUI0 275 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 FAM169BQ8N8A8 192 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 TTC9Q92623 222 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 GCDHQ92947 438 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 AP2M1Q96CW1 435 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 OR51J1Q9H342 316 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 MTG2Q9H4K7 406 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 ZFP64Q9NPA5 681 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 OR6C2Q9NZP2 312 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 SRRDQ9UH36 339 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 PATJQ8NI35 1801 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 DNAH14Q0VDD8 3507 aa9.3□□□□□ -0.92
PTCHD4-202ENST00000398738 LOC285556D6RIA3 1793 aa9.29□□□□□ -0.92
PTCHD4-202ENST00000398738 MPC2O95563 127 aa9.29□□□□□ -0.92
PTCHD4-202ENST00000398738 LGI1O95970 557 aa9.29□□□□□ -0.92
PTCHD4-202ENST00000398738 MT-ND4P03905 459 aa9.29□□□□□ -0.92
PTCHD4-202ENST00000398738 FAM157BP0CG42 384 aa9.29□□□□□ -0.92
PTCHD4-202ENST00000398738 ACLYP53396 1101 aa9.29□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC3A1Q07837 685 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms