RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 TGM4P49221 684 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CEBPGP53567 150 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 TAS2R38P59533 333 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ACTR1AP61163 376 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 KCNC4Q03721 635 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CAMK2DQ13557 499 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 LRRC26Q2I0M4 334 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ZFP69Q49AA0 526 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 IGSF11Q5DX21 431 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PRRT3Q5FWE3 981 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ANKRD53Q8N9V6 530 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 NUP43Q8NFH3 380 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 OR51G2Q8NGK0 314 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ST7LQ8TDW4 575 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SLC30A2Q9BRI3 323 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ISG20L2Q9H9L3 353 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PRSS16Q9NQE7 514 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CCDC59Q9P031 241 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF222Q9UK12 451 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ZFR2Q9UPR6 939 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PADI2Q9Y2J8 665 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CLCA3PQ9Y6N3 262 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 LTBP1Q14766 1721 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 GRXCR1A8MXD5 290 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 MOSPD3O75425 235 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 KCNK2O95069 426 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CDH11P55287 796 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 LIM2P55344 173 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CD83Q01151 205 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF45Q02386 682 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CCNJQ5T5M9 372 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 MLIPQ5VWP3 458 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 TSEN54Q7Z6J9 526 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 KLHL36Q8N4N3 616 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 GPR32P1Q8NGA4 272 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 OR52E1Q8NGJ3 308 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CPT1CQ8TCG5 803 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 TRIM43Q96BQ3 446 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ITPKCQ96DU7 683 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 BSCL2Q96G97 398 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF486Q96H40 463 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 KXD1Q9BQD3 176 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 IFT27Q9BW83 186 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 HDHD5Q9BXW7 423 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SERHL2Q9H4I8 314 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 OSGIN1Q9UJX0 560 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 HCN2Q9UL51 889 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 STON1Q9Y6Q2 735 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 C2orf92A0A1B0GVN3 265 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PRKYO43930 277 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 OXSR1O95747 527 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PSMA1P25786 263 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PIK3CBP42338 1070 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SLAMF1Q13291 335 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SF3B4Q15427 424 aaKnown RBP eCLIP4.66□□□□□ -1.661e-6■■■■■ 39.8
SMAD4-202ENST00000398417 LTB4RQ15722 352 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 FBXO43Q4G163 708 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 NUDT18Q6ZVK8 323 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 HDDC2Q7Z4H3 204 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 NRROSQ86YC3 692 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 TMEM104Q8NE00 496 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 OR9A2Q8NGT5 310 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ZFPM2Q8WW38 1151 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CHFRQ96EP1 664 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 MS4A8Q9BY19 250 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 STUB1Q9UNE7 303 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 N6AMT1Q9Y5N5 214 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 GTF3C1Q12789 2109 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 A0A1W2PQU0 124 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 DAPL1A0PJW8 107 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 ZC3H12DA2A288 527 aaKnown RBP4.65□□□□□ -1.66
SMAD4-202ENST00000398417 MYOGP15173 224 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 IL32P24001 234 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 SDC2P34741 201 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 BMPR1AP36894 532 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 EIF2DP41214 584 aaKnown RBP4.65□□□□□ -1.66
SMAD4-202ENST00000398417 GPR4P46093 362 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 LSM11P83369 360 aaKnown RBP eCLIP4.65□□□□□ -1.66
SMAD4-202ENST00000398417 PCDH1Q08174 1060 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 PDGFRLQ15198 375 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 DUSP7Q16829 419 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 KLHL22Q53GT1 634 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 PIP5KL1Q5T9C9 394 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 SLX4IPQ5VYV7 408 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 PLAG1Q6DJT9 500 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 ACSM5Q6NUN0 579 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 RNF165Q6ZSG1 346 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 OOSP2Q86WS3 158 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 KLBQ86Z14 1044 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 NRMQ8IXM6 262 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 OR52P1PQ8NH57 321 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 SPRYD4Q8WW59 207 aaPredicted RBP4.65□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF354BQ96LW1 612 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 SRMSQ9H3Y6 488 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 IL23AQ9NPF7 189 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 DPP7Q9UHL4 492 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 DICER1Q9UPY3 1922 aaKnown RBP4.65□□□□□ -1.66
SMAD4-202ENST00000398417 A0A1B0GVC2 190 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 OR6C70A6NIJ9 312 aa4.65□□□□□ -1.66
SMAD4-202ENST00000398417 A6NIN4 97 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms