RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PSD4Q8NDX1 1056 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 ZNF675Q8TD23 568 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 LAMP1P11279 417 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 S100A1P23297 94 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 PLBD1Q6P4A8 553 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 OR6Q1Q8NGQ2 317 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 SGCZQ96LD1 299 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 HSD3B1P14060 373 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 HSD3B2P26439 372 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 RGS19P49795 217 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 ADAM17P78536 824 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 ZNF572Q7Z3I7 529 aaPredicted RBP10.76□□□□□ -0.69
TTC28-201ENST00000397906 CPT1CQ8TCG5 803 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 KLHL21Q9UJP4 597 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 SCP2D1Q9UJQ7 156 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 ZNF175Q9Y473 711 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 B3GALT1Q9Y5Z6 326 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 BHMG1C9JSJ3 638 aaPredicted RBP10.76□□□□□ -0.69
TTC28-201ENST00000397906 FRKP42685 505 aaPredicted RBP10.76□□□□□ -0.69
TTC28-201ENST00000397906 LRRC18Q8N456 261 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 DTD2Q96FN9 168 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 DPAGT1Q9H3H5 408 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 RNF6Q9Y252 685 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 CTSCP53634 463 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 KLHDC10Q6PID8 442 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 OR52R1Q8NGF1 315 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 SLC18B1Q6NT16 456 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 ERMP1Q7Z2K6 904 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 OR8J3Q8NGG0 315 aa10.76□□□□□ -0.69
TTC28-201ENST00000397906 NECAB3Q96P71 396 aaPredicted RBP10.76□□□□□ -0.69
TTC28-201ENST00000397906 NXF5Q9H1B4 397 aaKnown RBP10.76□□□□□ -0.69
TTC28-201ENST00000397906 M0R036 132 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 TBX10O75333 385 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 SOX3P41225 446 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 RBPJQ06330 500 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 KANK2Q63ZY3 851 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 RPL13AP3Q6NVV1 102 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 OR9A4Q8NGU2 314 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 MS4A4EQ96PG1 132 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 NKX1-2Q9UD57 310 aaPredicted RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 UBL4AP11441 157 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 CD97P48960 835 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 GRHL2Q6ISB3 625 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 VWA5B2Q8N398 1253 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 COQ8AQ8NI60 647 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 TMEM168Q9H0V1 697 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 KCNIP1Q9NZI2 227 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 MRPL15Q9P015 296 aaKnown RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 USP36Q9P275 1121 aaKnown RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 G3V3Y1 287 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 LCKP06239 509 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 PYCR1P32322 319 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 ANKRD54Q6NXT1 300 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 RNF175Q8N4F7 328 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 MFSD8Q8NHS3 518 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 KCNN1Q92952 543 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 ADOQ96SZ5 270 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 PELI2Q9HAT8 420 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 FRS3O43559 492 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 NDUFV2P19404 249 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 ERVPABLB-1P60509 514 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 DEFA5Q01523 94 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 SLC12A9Q9BXP2 914 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 DNAJB11Q9UBS4 358 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 OR6C70A6NIJ9 312 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 ACTL6BO94805 426 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 DCKP27707 260 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 RBMXP38159 391 aaKnown RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 SH3BP2P78314 561 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 TMEM69Q5SWH9 247 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 PM20D1Q6GTS8 502 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 RAB12Q6IQ22 244 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 KIAA1211LQ6NV74 962 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 ZNF775Q96BV0 537 aaPredicted RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 MAN2C1Q9NTJ4 1040 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 LAMB4A4D0S4 1761 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 KIR2DS5A0A0G2JLQ3 304 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 A0A0G2JNG1 304 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 KIR2DS3K7RE56 304 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 KIR2DS5Q14953 304 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 ENAMQ9NRM1 1142 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 FMO6PO60774 539 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 TMEM225BP0DP42 221 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 ANXA3P12429 323 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 EIF2B1Q14232 305 aaKnown RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 MLF2Q15773 248 aaPredicted RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 CDS1Q92903 461 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 SPTSSAQ969W0 71 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 MTHFD2LQ9H903 347 aaPredicted RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 VSX1Q9NZR4 365 aaPredicted RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 BAIAP2Q9UQB8 552 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 GXYLT2A0PJZ3 443 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 SDHDO14521 159 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 AFF3P51826 1226 aaKnown RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 ROR2Q01974 943 aaKnown RBP10.75□□□□□ -0.69
TTC28-201ENST00000397906 TMEM236Q5W0B7 351 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 ATG9BQ674R7 924 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 C22orf42Q6IC83 251 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 TMEM184AQ6ZMB5 413 aa10.75□□□□□ -0.69
TTC28-201ENST00000397906 KATNBL1Q9H079 304 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms