RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PCDHGA1Q9Y5H4 931 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 POLR1CO15160 346 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 CLPXO76031 633 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 FHP07954 510 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 PCMT1P22061 227 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 PPP2R1BP30154 601 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 SLC13A2Q13183 592 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 TMED1Q13445 227 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 LTB4RQ15722 352 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.07■□□□□ 0.483e-8■■■■■ 44.2
PDLIM2-204ENST00000397760 ARHGAP40Q5TG30 622 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 KDM4DQ6B0I6 523 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 ZZZ3Q8IYH5 903 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 HSPBAP1Q96EW2 488 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 CMKLR1Q99788 373 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 ASPSCR1Q9BZE9 553 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 RAD21L1Q9H4I0 556 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 EPS8L2Q9H6S3 715 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 PRTFDC1Q9NRG1 225 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 GPATCH2Q9NW75 528 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 TOR4AQ9NXH8 423 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 AKAP7Q9P0M2 348 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 TRPC4Q9UBN4 977 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 ENPP5Q9UJA9 477 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 BAG5Q9UL15 447 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 TPRKBQ9Y3C4 175 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 CTNSO60931 367 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 JRKO75564 520 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 KCNK5O95279 499 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 ZNF182P17025 639 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 KDELR2P33947 212 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 CRATP43155 626 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 MVDP53602 400 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 CASP9P55211 416 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 MC2RQ01718 297 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 SAXO2Q658L1 398 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 TMEM107Q6UX40 140 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 CBLL1Q75N03 491 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 SLC38A9Q8NBW4 561 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 BPIFB6Q8NFQ5 453 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 OR52N2Q8NGI0 321 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 CLIP3Q96DZ5 547 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 NEURL3Q96EH8 262 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 APOL4Q9BPW4 351 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 STRADBQ9C0K7 418 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 CCNB1IP1Q9NPC3 277 aa18.07■□□□□ 0.48
PDLIM2-204ENST00000397760 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 FABP3P05413 133 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 HBQ1P09105 142 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 CD247P20963 164 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 BTG2P78543 158 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 COX20Q5RI15 118 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 CDCP2Q5VXM1 449 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 TMEM64Q6YI46 380 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 SZRD1Q7Z422 152 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 C6orf120Q7Z4R8 191 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 RNF130Q86XS8 419 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 ZC3H7AQ8IWR0 971 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 KAT2AQ92830 837 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 ELP4Q96EB1 424 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 PLEKHA8Q96JA3 519 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 OR1F2PQ96R84 312 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 DUSP21Q9H596 190 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 FBXO8Q9NRD0 319 aa18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 ZCCHC3Q9NUD5 404 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-204ENST00000397760 OR2W5A6NFC9 320 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 ZNF99A8MXY4 864 aaPredicted RBP18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 PROB1E7EW31 1015 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 TMX2-CTNND1H3BSU7 103 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 PRKACGP22612 351 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 MC3RP41968 323 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 CLDN6P56747 220 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 HSD17B7P56937 341 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 CSNK2BP67870 215 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 MVKQ03426 396 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 STX4Q12846 297 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 FUNDC2Q9BWH2 189 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 SCN3BQ9NY72 215 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 RAPGEFL1Q9UHV5 662 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 NUP214P35658 2090 aaPredicted RBP18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 ZNF682O95780 498 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 ANGPTL1O95841 491 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 ATP1B1P05026 303 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 SLC35E2P0CK97 266 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 ETFAP13804 333 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 BMXP51813 675 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 PRKAG1P54619 331 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 FADDQ13158 208 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 TP53BP2Q13625 1128 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 ISXQ2M1V0 245 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 TBC1D25Q3MII6 688 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 DHRS13Q6UX07 377 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 GLRX5Q86SX6 157 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 ZNF554Q86TJ5 538 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 TSPYL5Q86VY4 417 aaPredicted RBP18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 DEFB124Q8NES8 71 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 SFXN5Q8TD22 340 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 CHST8Q9H2A9 424 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 C3orf14Q9HBI5 128 aa18.05■□□□□ 0.48
PDLIM2-204ENST00000397760 LANCL2Q9NS86 450 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms