RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 EEF1A2Q05639 463 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 C1orf189Q5VU69 101 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 PRAMEF9Q5VWM5 478 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SIGIRRQ6IA17 410 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 RPTNQ6XPR3 784 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SSX6Q7RTT6 188 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 TSEN54Q7Z6J9 526 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 ZBTB44Q8NCP5 570 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 MAFIPQ8WZ33 124 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SLC7A6Q92536 515 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 GGHQ92820 318 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 MOAP1Q96BY2 351 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 EGLN2Q96KS0 407 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SLC7A5P2Q9GIP4 190 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 CD84Q9UIB8 345 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 GPR34Q9UPC5 381 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 LIPT1Q9Y234 373 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 EXOSC1Q9Y3B2 195 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 FAM170BA6NMN3 283 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 CAPN5O15484 640 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 PDYNP01213 254 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 H1F0P07305 194 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 FGL1Q08830 312 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 IQCHQ86VS3 1027 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 APOBEC4Q8WW27 367 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 FYTTD1Q96QD9 318 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 OR51I1Q9H343 314 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 J3QLW9 94 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 PSMD9O00233 223 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SERPINA3P01011 423 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 C1GALT1C1LP0DN25 315 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SRCP12931 536 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF19P17023 458 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 HLA-DMAP28067 261 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 EPHA5P54756 1037 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 DSTNP60981 165 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 C18orf21Q32NC0 220 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 LINGO4Q6UY18 593 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 CCDC107Q8WV48 283 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 TCEAL3Q969E4 200 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 DHRS9Q9BPW9 319 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 CCM2Q9BSQ5 444 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SARGQ9BW04 601 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SLC25A19Q9HC21 320 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 GALNT9Q9HCQ5 603 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 TRIM36Q9NQ86 728 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 A0A1W2PPK0 400 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 H3BSH0 61 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 THEGLP0DJG4 465 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 CELP19835 753 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 EDNRAP25101 427 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 RAB8AP61006 207 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SKP1P63208 163 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 TGM3Q08188 693 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 POM121L1PQ3SYA9 428 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 C12orf73Q69YU5 71 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 RTL4Q6ZR62 310 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SLC39A11Q8N1S5 342 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 DNAJC5GQ8N7S2 189 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 HAVCR2Q8TDQ0 301 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 PHYHIPQ92561 330 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 ZSWIM3Q96MP5 696 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 C17orf62Q9BQA9 187 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 CACNG6Q9BXT2 260 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 VNN3Q9NY84 501 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 ACSL5Q9ULC5 683 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 CBLCQ9ULV8 474 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 POLR1DQ9Y2S0 133 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 CACNG2Q9Y698 323 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 OTOFQ9HC10 1997 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 MYADML2A6NDP7 307 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 M0R082 166 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 PRODHO43272 600 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF780AO75290 641 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 RBM34P42696 430 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 RGS8P57771 180 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 VSX2P58304 361 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 POU6F2P78424 691 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 KCNJ10P78508 379 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 MC1RQ01726 317 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 MLC1Q15049 377 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SEC23BQ15437 767 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 BTLAQ7Z6A9 289 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 JAZF1Q86VZ6 243 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 TTLQ8NG68 377 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 RBPMSQ93062 196 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SECISBP2Q96T21 854 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF416Q9BWM5 594 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 HDHD5Q9BXW7 423 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 FGF20Q9NP95 211 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 ACER3Q9NUN7 267 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 CACNG4Q9UBN1 327 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 NOP16Q9Y3C1 178 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 GOLGA4Q13439 2230 aaKnown RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 TTLL8A6PVC2 850 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 F8W036 122 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 FABP7O15540 132 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 GJB5O95377 273 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 TFP02787 698 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 HMGN1P05114 100 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms