RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CLPPQ16740 277 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 RPS26P11Q5JNZ5 115 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 TMEM64Q6YI46 380 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 VTCN1Q7Z7D3 282 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 CLVS1Q8IUQ0 354 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 ZFP90Q8TF47 636 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 RELTQ969Z4 430 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 PNPLA2Q96AD5 504 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 ELP4Q96EB1 424 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 NUDT22Q9BRQ3 303 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 CXorf36Q9H7Y0 433 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 UCK1Q9HA47 277 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 THSD1Q9NS62 852 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 IKZF2Q9UKS7 526 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 NPIPA1Q9UND3 350 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 MAN2B2Q9Y2E5 1009 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 PDCD11Q14690 1871 aaKnown RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 RGS5O15539 181 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 TNFSF14O43557 240 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 PRKRAO75569 313 aaKnown RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 PDGFBP01127 241 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 SDHBP21912 280 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 CA5AP35218 305 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 MED22Q15528 200 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 IQCCQ4KMZ1 466 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 KLHL22Q53GT1 634 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 RAET1LQ5VY80 246 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 FRMPD2BQ6IN97 320 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 ENPP6Q6UWR7 440 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 DNASE2BQ8WZ79 361 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 TSSK6Q9BXA6 273 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 TNFRSF12AQ9NP84 129 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 FANCFQ9NPI8 374 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 SLAMF8Q9P0V8 285 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 MBD1Q9UIS9 605 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-204ENST00000397606 PATJQ8NI35 1801 aa7.76□□□□□ -1.17
PTPRD-204ENST00000397606 MYOFQ9NZM1 2061 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 BLOC1S5-TXNDC5H3BN57 136 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 NELFEP18615 380 aaKnown RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 RPL5P46777 297 aaKnown RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 GK3PQ14409 553 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 EXT1Q16394 746 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 ALG10BQ5I7T1 473 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 SHQ1Q6PI26 577 aaKnown RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 KLHL24Q6TFL4 600 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 HDDC2Q7Z4H3 204 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 PRR22Q8IZ63 422 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 ANKFN1Q8N957 763 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 ANKRD53Q8N9V6 530 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 STT3BQ8TCJ2 826 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 SNX33Q8WV41 574 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 DNAJA4Q8WW22 397 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 COQ8BQ96D53 544 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 SENP5Q96HI0 755 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 RACGAP1Q9H0H5 632 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 PIGUQ9H490 435 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 SMOC1Q9H4F8 434 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 FAM227AF5H4B4 570 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 ZNF195O14628 629 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 MAOAP21397 527 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 ARRB2P32121 409 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 TIAL1Q01085 375 aaKnown RBP eCLIP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 MS4A2Q01362 244 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 DSG2Q14126 1118 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 IL11RAQ14626 422 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 PTGES3Q15185 160 aaKnown RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 ADNP2Q6IQ32 1131 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 ENDOVQ8N8Q3 282 aaKnown RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 OR4D9Q8NGE8 314 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 OR2I1PQ8NGU4 316 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 IP6K3Q96PC2 410 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 SPNS1Q9H2V7 528 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 KLHL1Q9NR64 748 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 A0A1B0GTL3 188 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 A0A1W2PRG6 482 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 EFCAB10A6NFE3 127 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 IDSB3KWA1 339 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 CSO75390 466 aaKnown RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 SYNGR4O95473 234 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 UBL4AP11441 157 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 PRKACGP22612 351 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 ARG2P78540 354 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 LTB4RQ15722 352 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 EXOC3L2Q2M3D2 409 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 RNF165Q6ZSG1 346 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 CA13Q8N1Q1 262 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 TMEM151AQ8N4L1 468 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 EFHD2Q96C19 240 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 LCORQ96JN0 433 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 TIMMDC1Q9NPL8 285 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 SACM1LQ9NTJ5 587 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 TSC22D4Q9Y3Q8 395 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 HEMK1Q9Y5R4 338 aaPredicted RBP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 KCNE1BA0A087WTH5 132 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 CDC40O60508 579 aaKnown RBP eCLIP7.75□□□□□ -1.17
PTPRD-204ENST00000397606 ETHE1O95571 254 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 ZNF28P17035 718 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 PMS2P3Q13401 168 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 IL18R1Q13478 541 aa7.75□□□□□ -1.17
PTPRD-204ENST00000397606 SYPL1Q16563 259 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms