RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TCTN3Q6NUS6 607 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 FAM171BQ6P995 826 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 UQCC3Q6UW78 93 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 Q6ZUG5 572 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 CENPUQ71F23 418 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 RD3Q7Z3Z2 195 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 DCXRQ7Z4W1 244 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 D2HGDHQ8N465 521 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 KYQ8NBH2 561 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 OR52N4Q8NGI2 321 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 OR5M8Q8NGP6 311 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 OR52I2Q8NH67 350 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 LCORQ96JN0 433 aaPredicted RBP6.23□□□□□ -1.41
SMCO1-201ENST00000397537 LMLNQ96KR4 655 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 NSMCE3Q96MG7 304 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 VSTM2LQ96N03 204 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 ZNF570Q96NI8 536 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 VCXQ9H320 206 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 NARFLQ9H6Q4 476 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 PPP1R3EQ9H7J1 279 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 SEBOXQ9HB31 216 aaPredicted RBP6.23□□□□□ -1.41
SMCO1-201ENST00000397537 PXMP2Q9NR77 195 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 POT1Q9NUX5 634 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 MED17Q9NVC6 651 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 BCAP29Q9UHQ4 241 aa6.23□□□□□ -1.41
SMCO1-201ENST00000397537 DBX1A6NMT0 343 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SERPINE3A8MV23 424 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 HHLA1C9JL84 531 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 C1QTNF3-AMACRE9PGA6 284 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 I6L893 689 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ITGB1BP1O14713 200 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SLC16A5O15375 505 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 COCHO43405 550 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ZBTB11O95625 1053 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ELANEP08246 267 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ETS2P15036 469 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 PPP3CBP16298 524 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ATF6P18850 670 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 CASP14P31944 242 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 OTX1P32242 354 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 KCNJ3P48549 501 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 KCNK10P57789 538 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SLC3A1Q07837 685 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 CDC20Q12834 499 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 CDH18Q13634 790 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SYPL1Q16563 259 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 TMEM31Q5JXX7 168 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 NT5DC1Q5TFE4 455 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 RHBDD2Q6NTF9 364 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 FAM122CQ6P4D5 195 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ZNF841Q6ZN19 808 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 GABRG1Q8N1C3 465 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SPATA6LQ8N4H0 392 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 TTLQ8NG68 377 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 OR5T3Q8NGG3 340 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 OR10Q1Q8NGQ4 319 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 FANK1Q8TC84 345 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 HCAR2Q8TDS4 363 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SSMEM1Q8WWF3 244 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ING5Q8WYH8 240 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 KRT12Q99456 494 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 TM6SF2Q9BZW4 377 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 CCNB1IP1Q9NPC3 277 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ARMC1Q9NVT9 282 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 C19orf73Q9NVV2 129 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 CISD1Q9NZ45 108 aaKnown RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 PTTG2Q9NZH5 202 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 EXOGQ9Y2C4 368 aaKnown RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 DUSP10Q9Y6W6 482 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 COL5A3P25940 1745 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 HTTP42858 3142 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 TRAV24A0A0B4J272 114 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 A0A1B0GVG6 124 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 PRSS51A0A1B0GVH4 220 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 LEFTY2O00292 366 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 TRAFD1O14545 582 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 CCNB2O95067 398 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 BRI3O95415 125 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 IFNA14P01570 189 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 HMGN1P05114 100 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 KRT7P08729 469 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 RPL21P46778 160 aaKnown RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 COMPP49747 757 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 MMP15P51511 669 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 MAT1AQ00266 395 aaKnown RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 CDK16Q00536 496 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 IL10RBQ08334 325 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ILF2Q12905 390 aaKnown RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 GRIK2Q13002 908 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 PKP1Q13835 747 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 EXOSC2Q13868 293 aaKnown RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 RBBP7Q16576 425 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 C18orf21Q32NC0 220 aaPredicted RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 ANXA2RQ3ZCQ2 193 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SYT14P1Q58G82 188 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 TTMPQ5BVD1 217 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 SNRNP48Q6IEG0 339 aaKnown RBP6.22□□□□□ -1.41
SMCO1-201ENST00000397537 C1orf94Q6P1W5 598 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 KIRREL2Q6UWL6 708 aa6.22□□□□□ -1.41
SMCO1-201ENST00000397537 DHRS13Q6UX07 377 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms