RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 LAMP3Q9UQV4 416 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 PLLPQ9Y342 182 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 ZNF175Q9Y473 711 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 ANGPTL3Q9Y5C1 460 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 GOLGA6L10A6NI86 522 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 OVOL3O00110 214 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 UBXN8O00124 270 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 FOXE1O00358 373 aaPredicted RBP13.46□□□□□ -0.25
SEC13-206ENST00000397102 UGDHO60701 494 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 KERAO60938 352 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 PIAS1O75925 651 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 GRK2P25098 689 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 DSCR4P56555 118 aaPredicted RBP13.46□□□□□ -0.25
SEC13-206ENST00000397102 CLDN15P56746 228 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 RAB10P61026 200 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 PDIA2Q13087 525 aaKnown RBP13.46□□□□□ -0.25
SEC13-206ENST00000397102 CPSF6Q16630 551 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEC13-206ENST00000397102 OR5M10Q6IEU7 315 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 FAM214BQ7L5A3 538 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 FNDC9Q8TBE3 224 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 WDR20Q8TBZ3 569 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 RNF138Q8WVD3 245 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 AKAP1Q92667 903 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEC13-206ENST00000397102 TMBIM1Q969X1 311 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 RBBP8Q99708 897 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 TXNDC16Q9P2K2 825 aa13.46□□□□□ -0.25
SEC13-206ENST00000397102 A8MV72 311 aaPredicted RBP13.45□□□□□ -0.26
SEC13-206ENST00000397102 B4DXG7 233 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 E7ESA3 106 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 REM1O75628 298 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 CBX7O95931 251 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 ALDOAP04075 364 aaKnown RBP13.45□□□□□ -0.26
SEC13-206ENST00000397102 FAM157CP0CG43 387 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 EMDP50402 254 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 NEK2P51955 445 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 GPX6P59796 221 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 OCRLQ01968 901 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 PON3Q15166 354 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 EXOC3L2Q2M3D2 409 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 ADAM5Q6NVV9 412 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 OR4K17Q8NGC6 315 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 OR52R1Q8NGF1 315 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 ZBED6CLQ96FA7 236 aaPredicted RBP13.45□□□□□ -0.26
SEC13-206ENST00000397102 OSBPL9Q96SU4 736 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 SERPINI1Q99574 410 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 NMRAL1Q9HBL8 299 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 ADAM29Q9UKF5 820 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 CES1P1Q9UKY3 287 aa13.45□□□□□ -0.26
SEC13-206ENST00000397102 GPR55Q9Y2T6 319 aaPredicted RBP13.45□□□□□ -0.26
SEC13-206ENST00000397102 C1orf226A1L170 272 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 CXorf49A8MYA2 514 aaPredicted RBP13.44□□□□□ -0.26
SEC13-206ENST00000397102 H0YC42 278 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 SEC14L5O43304 696 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 TSPAN2O60636 221 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 FCGR2AP12318 317 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 MTHFD2P13995 350 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 CSNK2A2P19784 350 aaPredicted RBP13.44□□□□□ -0.26
SEC13-206ENST00000397102 DEKP35659 375 aaKnown RBP13.44□□□□□ -0.26
SEC13-206ENST00000397102 SUCLG1P53597 346 aaKnown RBP13.44□□□□□ -0.26
SEC13-206ENST00000397102 GAS1P54826 345 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 TPD52P55327 224 aaPredicted RBP13.44□□□□□ -0.26
SEC13-206ENST00000397102 DLG1Q12959 904 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 EFR3AQ14156 821 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 TRMT12Q53H54 448 aaKnown RBP13.44□□□□□ -0.26
SEC13-206ENST00000397102 RAET1LQ5VY80 246 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 SLC48A1Q6P1K1 146 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 STAC2Q6ZMT1 411 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 WFDC8Q8IUA0 241 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 L3MBTL4Q8NA19 623 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 CDKL2Q92772 493 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 ADOQ96SZ5 270 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 CPNE1Q99829 537 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 STMN4Q9H169 189 aaPredicted RBP13.44□□□□□ -0.26
SEC13-206ENST00000397102 SLCO5A1Q9H2Y9 848 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 FANCFQ9NPI8 374 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 PLSCR4Q9NRQ2 329 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 PCDHA9Q9Y5H5 950 aa13.44□□□□□ -0.26
SEC13-206ENST00000397102 UQCRHLA0A096LP55 91 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 LINC01387J3KSC0 135 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 ERAL1O75616 437 aaKnown RBP13.43□□□□□ -0.26
SEC13-206ENST00000397102 SEC31AO94979 1220 aaKnown RBP13.43□□□□□ -0.26
SEC13-206ENST00000397102 KLK1P06870 262 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 ACVR1BP36896 505 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 FEN1P39748 380 aaKnown RBP13.43□□□□□ -0.26
SEC13-206ENST00000397102 GP5P40197 560 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 RPS3AP61247 264 aaKnown RBP13.43□□□□□ -0.26
SEC13-206ENST00000397102 GANABQ14697 944 aaKnown RBP13.43□□□□□ -0.26
SEC13-206ENST00000397102 CCNYL2Q5T2Q4 361 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 DNM1P46Q6ZS02 220 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 PAGE2Q7Z2X7 111 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 ZBED8Q8IZ13 594 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 METTL25Q8N6Q8 603 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 FADS6Q8N9I5 356 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 OR6K3Q8NGY3 331 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 GFM2Q969S9 779 aaKnown RBP13.43□□□□□ -0.26
SEC13-206ENST00000397102 FBXW5Q969U6 566 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 GTPBP3Q969Y2 492 aaKnown RBP13.43□□□□□ -0.26
SEC13-206ENST00000397102 BTBD9Q96Q07 612 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 OR10A4Q9H209 315 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 PPP4R1LQ9P1A2 415 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms