RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ANKK1Q8NFD2 765 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 OR5H6Q8NGV6 325 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 DNAJA4Q8WW22 397 aaPredicted RBP12.53□□□□□ -0.4
TRIM40-207ENST00000396581 LINC00615Q96LM1 132 aaPredicted RBP12.53□□□□□ -0.4
TRIM40-207ENST00000396581 HYLS1Q96M11 299 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 DCLRE1CQ96SD1 692 aaKnown RBP12.53□□□□□ -0.4
TRIM40-207ENST00000396581 JAM3Q9BX67 310 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 MS4A8Q9BY19 250 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 ABCG4Q9H172 646 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 NT5DC2Q9H857 520 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 SLC28A3Q9HAS3 691 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 MCUBQ9NWR8 336 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 ASB6Q9NWX5 421 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 TAS2R7Q9NYW3 318 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 SLC9A8Q9Y2E8 581 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 GPSM3Q9Y4H4 160 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 CLCA3PQ9Y6N3 262 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 SMIM30A4D0T7 59 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 WASHC1A8K0Z3 465 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 AKR7A2O43488 359 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 SLC28A2O43868 658 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 ICMTO60725 284 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 SLC19A2O60779 497 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 LALBAP00709 142 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 HLA-DPB1P04440 258 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 CTSLP07711 333 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 CD79BP40259 229 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 RECQLP46063 649 aaPredicted RBP12.52□□□□□ -0.4
TRIM40-207ENST00000396581 SLC6A11P48066 632 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 CCT3P49368 545 aaKnown RBP12.52□□□□□ -0.4
TRIM40-207ENST00000396581 DHCR24Q15392 516 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 SMUG1Q53HV7 270 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 PRAMEF14Q5SWL7 426 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 PRAMEF13Q5VWM6 474 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 VASNQ6EMK4 673 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 ZNF782Q6ZMW2 699 aaPredicted RBP12.52□□□□□ -0.4
TRIM40-207ENST00000396581 CFAP206Q8IYR0 622 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 TP53I13Q8NBR0 393 aaPredicted RBP12.52□□□□□ -0.4
TRIM40-207ENST00000396581 OR6T1Q8NGN1 323 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 BBS10Q8TAM1 723 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 SUN5Q8TC36 379 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 RNF32Q9H0A6 362 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 SAP130Q9H0E3 1048 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 DPEP2Q9H4A9 486 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 RERGLQ9H628 205 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 DZANK1Q9NVP4 752 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 B3GNT2Q9NY97 397 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 MRPL39Q9NYK5 338 aaKnown RBP12.52□□□□□ -0.4
TRIM40-207ENST00000396581 ADAM30Q9UKF2 790 aa12.52□□□□□ -0.4
TRIM40-207ENST00000396581 EXOGQ9Y2C4 368 aaKnown RBP12.52□□□□□ -0.4
TRIM40-207ENST00000396581 TMA7Q9Y2S6 64 aaKnown RBP12.52□□□□□ -0.4
TRIM40-207ENST00000396581 C17orf113A0A1B0GUU1 675 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 GABRPO00591 440 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 SHOXO15266 292 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 UBXN7O94888 489 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 IGHA1P01876 353 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 SLC6A1P30531 599 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 SOX18P35713 384 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
TRIM40-207ENST00000396581 HSPB3Q12988 150 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 TSTA3Q13630 321 aaPredicted RBP12.52□□□□□ -0.41
TRIM40-207ENST00000396581 IL18Q14116 193 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 ESCO2Q56NI9 601 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 ZNF805Q5CZA5 627 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 ARSIQ5FYB1 569 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 FAM78AQ5JUQ0 283 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 AADACL4Q5VUY2 407 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 TMEM215Q68D42 235 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 TMEM184AQ6ZMB5 413 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 RASSF6Q6ZTQ3 369 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 CCDC28AQ8IWP9 274 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 ELMOD2Q8IZ81 293 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 GHDCQ8N2G8 530 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 C9orf62Q8N4C0 152 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 OR8D4Q8NGM9 314 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 OR52N1Q8NH53 320 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 TEX47Q8TBZ9 253 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 GNPDA2Q8TDQ7 276 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 ACOT12Q8WYK0 555 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 SLC9A6Q92581 669 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 AKAP1Q92667 903 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRIM40-207ENST00000396581 FGF13Q92913 245 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 RSPRY1Q96DX4 576 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 ASB16Q96NS5 453 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 EGLN3Q9H6Z9 239 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 ATP13A2Q9NQ11 1180 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 LHX9Q9NQ69 397 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 GDE1Q9NZC3 331 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 CBLCQ9ULV8 474 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 LIPT1Q9Y234 373 aa12.52□□□□□ -0.41
TRIM40-207ENST00000396581 A0A087WUU8 490 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 INMT-MINDY4F8WBC2 141 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 CASC3O15234 703 aaKnown RBP12.51□□□□□ -0.41
TRIM40-207ENST00000396581 AKAP8O43823 692 aaKnown RBP12.51□□□□□ -0.41
TRIM40-207ENST00000396581 PLOD3O60568 738 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 ERGP11308 486 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 EVI2BP34910 448 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
TRIM40-207ENST00000396581 TSPAN31Q12999 210 aa12.51□□□□□ -0.41
TRIM40-207ENST00000396581 ADAM15Q13444 863 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms