RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TMBIM1Q969X1 311 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 OMA1Q96E52 524 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 PANX1Q96RD7 426 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 YIPF4Q9BSR8 244 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 INPP5KQ9BT40 448 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 BAHCC1Q9P281 2608 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 PRRC2CQ9Y520 2896 aaKnown RBP17.69■□□□□ 0.42
HOXA9-202ENST00000396345 RNF103-CHMP3A0A140T963 221 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 CCDC154A6NI56 674 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 TTLL8A6PVC2 850 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 TP53I11O14683 189 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 SUV39H1O43463 412 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 NME2P1O60361 137 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 REM1O75628 298 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 ACP2P11117 423 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 NME2P22392 152 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 GABRA3P34903 492 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 MAP3K8P41279 467 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 FBXW4P57775 412 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 GAB1Q13480 694 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 LASP1Q14847 261 aaKnown RBP17.68■□□□□ 0.42
HOXA9-202ENST00000396345 CYP27C1Q4G0S4 372 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 RPUSD3Q6P087 351 aaKnown RBP17.68■□□□□ 0.42
HOXA9-202ENST00000396345 ZNF621Q6ZSS3 439 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 C6orf120Q7Z4R8 191 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 GALNTL5Q7Z4T8 443 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 CLEC4FQ8N1N0 589 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 TRIML2Q8N7C3 387 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 PSD4Q8NDX1 1056 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 OR10G3Q8NGC4 313 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 OR4N2Q8NGD1 307 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 FBXO30Q8TB52 745 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 GPR151Q8TDV0 419 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 JADE3Q92613 823 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 HOXB13Q92826 284 aaPredicted RBP17.68■□□□□ 0.42
HOXA9-202ENST00000396345 SPDL1Q96EA4 605 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 ITCHQ96J02 903 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 Q9N2J8 555 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 SERHLQ9NQF3 203 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 MRGBPQ9NV56 204 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 GPATCH2Q9NW75 528 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 CBLCQ9ULV8 474 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 VPS4AQ9UN37 437 aa17.68■□□□□ 0.42
HOXA9-202ENST00000396345 FAF1Q9UNN5 650 aaPredicted RBP17.68■□□□□ 0.42
HOXA9-202ENST00000396345 KLF13Q9Y2Y9 288 aaPredicted RBP17.68■□□□□ 0.42
HOXA9-202ENST00000396345 RFXANKO14593 260 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 NKX2-2O95096 273 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 P04436 131 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 KRT16P08779 473 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 ALOX5P09917 674 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 KRT20P35900 424 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 CDKN2CP42773 168 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 SLC22A10Q63ZE4 541 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 NUP54Q7Z3B4 507 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 SLC16A11Q8NCK7 471 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 SLC35A5Q9BS91 424 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 ACTRT3Q9BYD9 372 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 SH2D2AQ9NP31 389 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 SACM1LQ9NTJ5 587 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 MAP10Q9P2G4 905 aa17.67■□□□□ 0.42
HOXA9-202ENST00000396345 EXPH5Q8NEV8 1989 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 GXYLT2A0PJZ3 443 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 KLRC4-KLRK1H3BQV0 150 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 RASAL1O95294 804 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 GSNP06396 782 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 CCL3P10147 92 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 CD1EP15812 388 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 CAPN3P20807 821 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 IL12BP29460 328 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 CHI3L1P36222 383 aaPredicted RBP17.66■□□□□ 0.42
HOXA9-202ENST00000396345 TRPC1P48995 793 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 RPP38P78345 283 aaKnown RBP17.66■□□□□ 0.42
HOXA9-202ENST00000396345 C19orf57Q0VDD7 668 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 INAQ16352 499 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 DECR1Q16698 335 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 EXOSC6Q5RKV6 272 aaKnown RBP17.66■□□□□ 0.42
HOXA9-202ENST00000396345 CDC73Q6P1J9 531 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 SLC2A7Q6PXP3 512 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 GK5Q6ZS86 529 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 CISD2Q8N5K1 135 aaKnown RBP17.66■□□□□ 0.42
HOXA9-202ENST00000396345 PAQR8Q8TEZ7 354 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 PIK3R3Q92569 461 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 SLC35G5Q96KT7 338 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 COL21A1Q96P44 957 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 SLC52A3Q9NQ40 469 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 SAR1AQ9NR31 198 aa17.66■□□□□ 0.42
HOXA9-202ENST00000396345 MRTO4Q9UKD2 239 aaKnown RBP17.66■□□□□ 0.42
HOXA9-202ENST00000396345 CHCHD2Q9Y6H1 151 aaPredicted RBP17.66■□□□□ 0.42
HOXA9-202ENST00000396345 OR6C70A6NIJ9 312 aa17.65■□□□□ 0.42
HOXA9-202ENST00000396345 PEX1O43933 1283 aa17.65■□□□□ 0.42
HOXA9-202ENST00000396345 SNX3O60493 162 aa17.65■□□□□ 0.42
HOXA9-202ENST00000396345 TSPAN2O60636 221 aa17.65■□□□□ 0.42
HOXA9-202ENST00000396345 KCNH1O95259 989 aa17.65■□□□□ 0.42
HOXA9-202ENST00000396345 ANP32DO95626 131 aa17.65■□□□□ 0.42
HOXA9-202ENST00000396345 MATN1P21941 496 aa17.65■□□□□ 0.42
HOXA9-202ENST00000396345 UBAP2LQ14157 1087 aaKnown RBP17.65■□□□□ 0.42
HOXA9-202ENST00000396345 DUSP5Q16690 384 aa17.65■□□□□ 0.42
HOXA9-202ENST00000396345 C6orf10Q5SRN2 563 aa17.65■□□□□ 0.42
HOXA9-202ENST00000396345 SAXO2Q658L1 398 aa17.65■□□□□ 0.42
HOXA9-202ENST00000396345 DNAJC14Q6Y2X3 702 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms