RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 RECQLP46063 649 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SLC3A1Q07837 685 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 NTRK2Q16620 822 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 KLHL12Q53G59 568 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ARL9Q6T311 187 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 TMEM25Q86YD3 366 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 RIT1Q92963 219 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 AP2M1Q96CW1 435 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 HYLS1Q96M11 299 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 DDX31Q9H8H2 851 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 C12orf4Q9NQ89 552 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ZCCHC3Q9NUD5 404 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ING4Q9UNL4 249 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SPEGQ15772 3267 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 RANBP2P49792 3224 aaKnown RBP13.47□□□□□ -0.25
CLIP2-203ENST00000395060 PLPP1O14494 284 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 PDPK1O15530 556 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 HSD3B1P14060 373 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 ZNF30P17039 623 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 TBXA2RP21731 343 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 GABRA5P31644 462 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 PER3P56645 1201 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 TAS2R41P59536 307 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 ADAM15Q13444 863 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 DEFB115Q30KQ5 88 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 TEX261Q6UWH6 196 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 FAM26EQ8N5C1 309 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 OR56A3Q8NH54 315 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 GOT1L1Q8NHS2 421 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-203ENST00000395060 APOBEC4Q8WW27 367 aaKnown RBP13.47□□□□□ -0.25
CLIP2-203ENST00000395060 CUEDC1Q9NWM3 386 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-203ENST00000395060 LSM7Q9UK45 103 aaKnown RBP13.47□□□□□ -0.25
CLIP2-203ENST00000395060 SPATA2Q9UM82 520 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 CCL26Q9Y258 94 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 U3KQ87 197 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 POM121CA8CG34 1229 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 GREM1O60565 184 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 C1orf105O95561 183 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 CFDP00746 253 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-203ENST00000395060 RB1P06400 928 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 FAM157BP0CG42 384 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 ACP2P11117 423 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 AHRP35869 848 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 KCNJ5P48544 419 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 SF3A2Q15428 464 aaKnown RBP13.47□□□□□ -0.25
CLIP2-203ENST00000395060 TMEM201Q5SNT2 666 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 GDPD4Q6W3E5 623 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 RPTNQ6XPR3 784 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 PLEKHM3Q6ZWE6 761 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 FBXL6Q8N531 539 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 ZNF461Q8TAF7 563 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 SLC5A11Q8WWX8 675 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 POLDIP3Q9BY77 421 aaKnown RBP13.47□□□□□ -0.25
CLIP2-203ENST00000395060 TAC3Q9UHF0 121 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 RASD1Q9Y272 281 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 ASF1AQ9Y294 204 aa13.47□□□□□ -0.25
CLIP2-203ENST00000395060 A0A087WUU8 490 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 SLC16A5O15375 505 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 MAGEB4O15481 346 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-203ENST00000395060 SSNA1O43805 119 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 REM1O75628 298 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 HSD3B2P26439 372 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 ACVR1BP36896 505 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 MAPK8P45983 427 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 CLDN2P57739 230 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 TAP2Q03519 686 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 PCDH1Q08174 1060 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 ELAVL2Q12926 359 aaKnown RBP13.46□□□□□ -0.25
CLIP2-203ENST00000395060 OCLNQ16625 522 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 SLC27A4Q6P1M0 643 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 PRSS45Q7RTY3 260 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 ADGRD2Q7Z7M1 963 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 PIAS4Q8N2W9 510 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-203ENST00000395060 GALNT11Q8NCW6 608 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 DUSP18Q8NEJ0 188 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 ZNF607Q96SK3 696 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 ZDHHC4Q9NPG8 344 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 SCML1Q9UN30 329 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 SIRT4Q9Y6E7 314 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-203ENST00000395060 KCNE3Q9Y6H6 103 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 B8ZZF3 427 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 H7BY64 318 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 SCAMP1O15126 338 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 PRODHO43272 600 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 PROM1O43490 865 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 SLC43A1O75387 559 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 LGI1O95970 557 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 MT-ND4P03905 459 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 FCER2P06734 321 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 TRIM23P36406 574 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 TALDO1P37837 337 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 RPS7P62081 194 aaKnown RBP13.46□□□□□ -0.25
CLIP2-203ENST00000395060 SUZ12Q15022 739 aaKnown RBP13.46□□□□□ -0.25
CLIP2-203ENST00000395060 BHLHB9Q6PI77 547 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 LYPD4Q6UWN0 246 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 SLC36A4Q6YBV0 504 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 OR13C5Q8NGS8 318 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 C16orf58Q96GQ5 468 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 PRAP1Q96NZ9 151 aa13.46□□□□□ -0.25
CLIP2-203ENST00000395060 MAN2C1Q9NTJ4 1040 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms