RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 LRIT3Q3SXY7 679 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 ENTHD1Q8IYW4 607 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 HLA-CQ95604 372 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 NEURL3Q96EH8 262 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 DUS3LQ96G46 650 aaKnown RBP14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 DGAT2Q96PD7 388 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 ALOXE3Q9BYJ1 711 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 SNTG1Q9NSN8 517 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 TMEM45AQ9NWC5 275 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 FBXO34Q9NWN3 711 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 SCML1Q9UN30 329 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 NEUROG3Q9Y4Z2 214 aa14.92□□□□□ -0.02
SMARCD1-202ENST00000394963 WWP2O00308 870 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 MAN2B1O00754 1011 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 ENTPD6O75354 484 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 UBXN7O94888 489 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 HNRNPFP52597 415 aaKnown RBP14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 SMIM11AP58511 58 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 NDUFAF6Q330K2 333 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 C10orf62Q5T681 223 aaPredicted RBP14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 SLC48A1Q6P1K1 146 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 VN1R4Q7Z5H5 301 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 ZNF563Q8TA94 476 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 PIGXQ8TBF5 258 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 HTRA1Q92743 480 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 DPH1Q9BZG8 443 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 LRIT1Q9P2V4 623 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 ERVK-19Q9WJR5 959 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 A8MVJ9 347 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 HPRP00739 348 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 GYPBP06028 91 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 SOX3P41225 446 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 APOFQ13790 326 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 PUM1Q14671 1186 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 KIR2DS3Q14952 304 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 SPCS2Q15005 226 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 DGUOKQ16854 277 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 LIPKQ5VXJ0 399 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 TCTN3Q6NUS6 607 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 TSPYL5Q86VY4 417 aaPredicted RBP14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 OR52R1Q8NGF1 315 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 GAL3ST3Q96A11 431 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 Q96MT0 163 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 SLC38A2Q96QD8 506 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 DSN1Q9H410 356 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 PRTFDC1Q9NRG1 225 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 ACER3Q9NUN7 267 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 TMEM74BQ9NUR3 256 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 TRNAU1APQ9NX07 287 aaKnown RBP14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 SLC7A7Q9UM01 511 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 SPIN1Q9Y657 262 aaPredicted RBP14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 AP1M2Q9Y6Q5 423 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 USP34Q70CQ2 3546 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 DUXAA6NLW8 204 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 BCAS1O75363 584 aaPredicted RBP14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 APBB3O95704 486 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 XCR1P46094 333 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 INPP1P49441 399 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 SEC23BQ15437 767 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 DUSP5Q16690 384 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 MFSD9Q8NBP5 474 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 B3GNT7Q8NFL0 401 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 PHOSPHO1Q8TCT1 267 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 RASSF5Q8WWW0 418 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 RIT1Q92963 219 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 VMP1Q96GC9 406 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 C7orf34Q96L11 122 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 GDF15Q99988 308 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 WASH6PQ9NQA3 447 aa14.91□□□□□ -0.02
SMARCD1-202ENST00000394963 DYRK3O43781 588 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 PRPH2P23942 346 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 IFNGR2P38484 337 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 OR1D5P58170 312 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 NFATC3Q12968 1075 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 OR2I1PQ8NGU4 316 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 RAB2BQ8WUD1 216 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 DDX31Q9H8H2 851 aaKnown RBP14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 SYNPO2LQ9H987 977 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 ZBTB20Q9HC78 741 aaPredicted RBP14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 TANC1Q9C0D5 1861 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 FAM171A2A8MVW0 826 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 GPR89AB7ZAQ6 455 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 GPR89BP0CG08 455 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 GNSP15586 552 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 MAN2A2P49641 1150 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 NCF4Q15080 339 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 OR10H4Q8NGA5 316 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 OR52L1Q8NGH7 329 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 ZNF675Q8TD23 568 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 CREB3L4Q8TEY5 395 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 ZNF354BQ96LW1 612 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 PHF7Q9BWX1 381 aaPredicted RBP14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 OR51E2Q9H255 320 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 DCSTAMPQ9H295 470 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 LHX9Q9NQ69 397 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 PAK1IP1Q9NWT1 392 aaPredicted RBP14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 ATXN7L1Q9ULK2 861 aaPredicted RBP14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 COLQQ9Y215 455 aaPredicted RBP14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 PI4KAP42356 2102 aa14.9□□□□□ -0.02
SMARCD1-202ENST00000394963 ARID1AO14497 2285 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms