RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FOLH1BQ9HBA9 442 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 TNFRSF12AQ9NP84 129 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 MID1IP1Q9NPA3 183 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 SLC35C2Q9NQQ7 365 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 PSMC3IPQ9P2W1 217 aaPredicted RBP15.08■□□□□ 0.01
PTPRK-208ENST00000392449 EXO1Q9UQ84 846 aaKnown RBP15.08■□□□□ 0.01
PTPRK-208ENST00000392449 ITPR3Q14573 2671 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 MAP1AP78559 2803 aaPredicted RBP15.08■□□□□ 0.01
PTPRK-208ENST00000392449 MBD3L4A6NDZ8 208 aaPredicted RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 MBD3L3A6NE82 208 aaPredicted RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 MBD3L5A6NJ08 208 aaPredicted RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 CD8B2A6NJW9 211 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 EEF1E1-BLOC1S5C9J1V9 151 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 G3V2L1 256 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 EEF1E1O43324 174 aaKnown RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 TSPAN2O60636 221 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 ERN1O75460 977 aaKnown RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 ENO1P06733 434 aaKnown RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 ANXA4P09525 319 aaPredicted RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 DRD2P14416 443 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 TACR1P25103 407 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 PKNOX1P55347 436 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 DCAF7P61962 342 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 SNTA1Q13424 505 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 SPDYAQ5MJ70 313 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 SLC22A9Q8IVM8 553 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 TRIM42Q8IWZ5 723 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 GBP7Q8N8V2 638 aaPredicted RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 MBD3L2Q8NHZ7 208 aaPredicted RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 G6PC3Q9BUM1 346 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 SHCBP1LQ9BZQ2 653 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 CLEC4MQ9H2X3 399 aaPredicted RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 SLC24A3Q9HC58 644 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 CCM2LQ9NUG4 571 aaPredicted RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 ZNF629Q9UEG4 869 aaPredicted RBP15.08■□□□□ 0
PTPRK-208ENST00000392449 CBLCQ9ULV8 474 aa15.08■□□□□ 0
PTPRK-208ENST00000392449 ZFHX3Q15911 3703 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 SETD2Q9BYW2 2564 aaPredicted RBP15.07■□□□□ 0
PTPRK-208ENST00000392449 MTORP42345 2549 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 PRRC2AP48634 2157 aaKnown RBP15.07■□□□□ 0
PTPRK-208ENST00000392449 OR6C70A6NIJ9 312 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 SHBGP04278 402 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 JUNP05412 331 aaKnown RBP15.07■□□□□ 0
PTPRK-208ENST00000392449 FLYWCH1Q4VC44 716 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 LARP4Q71RC2 724 aaKnown RBP eCLIP15.07■□□□□ 09e-6■■□□□ 12.1
PTPRK-208ENST00000392449 SLC44A2Q8IWA5 706 aaPredicted RBP15.07■□□□□ 0
PTPRK-208ENST00000392449 SLC35A4Q96G79 324 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 OR2B2Q9GZK3 357 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 RASSF1Q9NS23 344 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 TAS2R10Q9NYW0 307 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 FLRT3Q9NZU0 649 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 SENP1Q9P0U3 644 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 FETUBQ9UGM5 382 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 RPH3AQ9Y2J0 694 aaPredicted RBP15.07■□□□□ 0
PTPRK-208ENST00000392449 POLR3HQ9Y535 204 aaPredicted RBP15.07■□□□□ 0
PTPRK-208ENST00000392449 WIF1Q9Y5W5 379 aa15.07■□□□□ 0
PTPRK-208ENST00000392449 A6NNC1 897 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 H0Y3Z8 333 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 CDH16O75309 829 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 CBR3O75828 277 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 ACTL6AO96019 429 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 CYP4B1P13584 511 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 CTSSP25774 331 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 IL12BP29460 328 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 MC3RP41968 323 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 DGKQP52824 942 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 GFRA1P56159 465 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 ZNF155Q12901 538 aaPredicted RBP15.06■□□□□ 0
PTPRK-208ENST00000392449 HEPACAMQ14CZ8 416 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 ERCC6LQ2NKX8 1250 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 FBXL19-AS1Q494R0 122 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 SH2D4BQ5SQS7 431 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 GALNT18Q6P9A2 607 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 TMEM107Q6UX40 140 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 LCA5Q86VQ0 697 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 IFNEQ86WN2 208 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 PLCZ1Q86YW0 608 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 FAM9CQ8IZT9 166 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 GCNT2Q8N0V5 402 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 CEP112Q8N8E3 955 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 KIF18AQ8NI77 898 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 LINC01560Q8TB33 94 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 ACMSDQ8TDX5 336 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 TMCO6Q96DC7 493 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 CALHM2Q9HA72 323 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 GIMAP4Q9NUV9 329 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 PLEKHA6Q9Y2H5 1048 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 PTGDR2Q9Y5Y4 395 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 MED12LQ86YW9 2145 aa15.06■□□□□ 0
PTPRK-208ENST00000392449 SMIM23A6NLE4 172 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 CLCA1A8K7I4 914 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 SCO2O43819 266 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 PROCP04070 461 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 GSTA1P08263 222 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 TMIGD3P0DMS9 266 aaPredicted RBP15.05■□□□□ -0
PTPRK-208ENST00000392449 MYL2P10916 166 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 CPN1P15169 458 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 DDCP20711 480 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 GRK2P25098 689 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 NCBP2P52298 156 aaKnown RBP eCLIP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms