RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 POC5Q8NA72 575 aa14.03□□□□□ -0.16
SCFD2-201ENST00000388940 TMEM163Q8TC26 289 aa14.03□□□□□ -0.16
SCFD2-201ENST00000388940 FGF14Q92915 247 aa14.03□□□□□ -0.16
SCFD2-201ENST00000388940 TWSG1Q9GZX9 223 aa14.03□□□□□ -0.16
SCFD2-201ENST00000388940 TRIM45Q9H8W5 580 aaPredicted RBP14.03□□□□□ -0.16
SCFD2-201ENST00000388940 TBC1D29Q9UFV1 150 aa14.03□□□□□ -0.16
SCFD2-201ENST00000388940 SLC13A4Q9UKG4 626 aa14.03□□□□□ -0.16
SCFD2-201ENST00000388940 PCOLCE2Q9UKZ9 415 aa14.03□□□□□ -0.16
SCFD2-201ENST00000388940 ATG2BQ96BY7 2078 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 GSAPA4D1B5 854 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 DUXAA6NLW8 204 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 SNTNA6NMZ2 147 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 MAT2AP31153 395 aaKnown RBP14.02□□□□□ -0.16
SCFD2-201ENST00000388940 RPS19P39019 145 aaKnown RBP14.02□□□□□ -0.16
SCFD2-201ENST00000388940 LSM11P83369 360 aaKnown RBP eCLIP14.02□□□□□ -0.16
SCFD2-201ENST00000388940 BNC1Q01954 994 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 ST3GAL3Q11203 375 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 RAB40BQ12829 278 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 SNAPC1Q16533 368 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 SLC27A4Q6P1M0 643 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 PHC2Q8IXK0 858 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 SAMD14Q8IZD0 417 aaPredicted RBP14.02□□□□□ -0.16
SCFD2-201ENST00000388940 FAM83FQ8NEG4 500 aaPredicted RBP14.02□□□□□ -0.16
SCFD2-201ENST00000388940 OR4E2Q8NGC2 313 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 TEX47Q8TBZ9 253 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 SLC22A18Q96BI1 424 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 CCDC32Q9BV29 185 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 SAP130Q9H0E3 1048 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 IGFLR1Q9H665 355 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 ISYNA1Q9NPH2 558 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 PRDM9Q9NQV7 894 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 SCML1Q9UN30 329 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 YBX2Q9Y2T7 364 aaKnown RBP14.02□□□□□ -0.16
SCFD2-201ENST00000388940 CHST2Q9Y4C5 530 aa14.02□□□□□ -0.16
SCFD2-201ENST00000388940 SLC31A1O15431 190 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 PRODHO43272 600 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 AGR2O95994 175 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 ACP2P11117 423 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 LAMP2P13473 410 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 CPEP16870 476 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 GTF2E2P29084 291 aaKnown RBP14.02□□□□□ -0.17
SCFD2-201ENST00000388940 IFNA8P32881 189 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 RORCP51449 518 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 RGS1Q08116 209 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 SDE2Q6IQ49 451 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 SLC36A4Q6YBV0 504 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 PRICKLE2Q7Z3G6 844 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 HMGN2P46Q86SG4 172 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 ASPGQ86U10 573 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 VRK2Q86Y07 508 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 TM4SF19Q96DZ7 209 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 SLC35A4Q96G79 324 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 SLC30A2Q9BRI3 323 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 PLA2G12AQ9BZM1 189 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 QRSL1Q9H0R6 528 aaKnown RBP14.02□□□□□ -0.17
SCFD2-201ENST00000388940 SMURF1Q9HCE7 757 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 EXOSC4Q9NPD3 245 aaKnown RBP14.02□□□□□ -0.17
SCFD2-201ENST00000388940 KLHL28Q9NXS3 571 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 SSR3Q9UNL2 185 aa14.02□□□□□ -0.17
SCFD2-201ENST00000388940 GOLGA4Q13439 2230 aaKnown RBP14.01□□□□□ -0.17
SCFD2-201ENST00000388940 FAM170BA6NMN3 283 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 CTDSP2O14595 271 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 SMIM10L1P0DMW3 83 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 EN2P19622 333 aaPredicted RBP14.01□□□□□ -0.17
SCFD2-201ENST00000388940 SEPHS1P49903 392 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 DECR1Q16698 335 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 ANKRD54Q6NXT1 300 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 CDC73Q6P1J9 531 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 USP30Q70CQ3 517 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 C16orf62Q7Z3J2 963 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 KCT2Q8NC54 265 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 ZG16BQ96DA0 208 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 SMIM10Q96HG1 83 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 KCNS3Q9BQ31 491 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 RPP25Q9BUL9 199 aaKnown RBP14.01□□□□□ -0.17
SCFD2-201ENST00000388940 PRRG3Q9BZD7 231 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 EGLN3Q9H6Z9 239 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 POLMQ9NP87 494 aaPredicted RBP14.01□□□□□ -0.17
SCFD2-201ENST00000388940 SEMA4GQ9NTN9 838 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 PHF11Q9UIL8 331 aa14.01□□□□□ -0.17
SCFD2-201ENST00000388940 GPR55Q9Y2T6 319 aaPredicted RBP14.01□□□□□ -0.17
SCFD2-201ENST00000388940 TMEM129A0AVI4 362 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 SLC35F4A4IF30 521 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 BTN3A3O00478 584 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 STK25O00506 426 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 TNFSF14O43557 240 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 UBXN7O94888 489 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 EML2O95834 649 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 ALOX12P18054 663 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 TNFSF8P32971 234 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 ETV5P41161 510 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 OMPP47874 163 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 ETV1P50549 477 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 DEFA1P59665 94 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 DEFA3P59666 94 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 COPZ1P61923 177 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 PPP2CBP62714 309 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 PPP2CAP67775 309 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 TNFRSF17Q02223 184 aa14□□□□□ -0.17
SCFD2-201ENST00000388940 KIR2DS3Q14952 304 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms