RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 MESP1Q9BRJ9 268 aa24.94■■□□□ 1.58
MSX1-201ENST00000382723 SLC26A1Q9H2B4 701 aa24.94■■□□□ 1.58
MSX1-201ENST00000382723 SLC38A1Q9H2H9 487 aa24.94■■□□□ 1.58
MSX1-201ENST00000382723 BCL2L10Q9HD36 194 aa24.94■■□□□ 1.58
MSX1-201ENST00000382723 PCDHGB3Q9Y5G1 929 aa24.94■■□□□ 1.58
MSX1-201ENST00000382723 IGHV3-20A0A0C4DH32 117 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 A0A0G2JPF8 293 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 HNRNPCL2B2RXH8 293 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 HNRNPCL3B7ZW38 293 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 hCG_2039718K7EN88 272 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 FCMRO60667 390 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 ALOX12BO75342 701 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 HNRNPCL4P0DMR1 293 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 SLC5A2P31639 672 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 MAP3K8P41279 467 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 DUSP7Q16829 419 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 GRAMD1BQ3KR37 738 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 ARHGAP11BQ3KRB8 267 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 C3orf38Q5JPI3 329 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 FAM69BQ5VUD6 431 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 METTL21AQ8WXB1 218 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 CRB3Q9BUF7 120 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 QRSL1Q9H0R6 528 aaKnown RBP24.93■■□□□ 1.58
MSX1-201ENST00000382723 CALML5Q9NZT1 146 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 SEC14L3Q9UDX4 400 aa24.93■■□□□ 1.58
MSX1-201ENST00000382723 GPC6Q9Y625 555 aaPredicted RBP24.93■■□□□ 1.58
MSX1-201ENST00000382723 GXYLT2A0PJZ3 443 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 PROB1E7EW31 1015 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 SERPINB7O75635 380 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 DDAH2O95865 285 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 SEMG1P04279 462 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 CDK4P11802 303 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 PSG6Q00889 435 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 DCST2Q5T1A1 773 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 ANKRD37Q7Z713 158 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 OR7G1Q8NGA0 311 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 DAZLQ92904 295 aaKnown RBP24.92■■□□□ 1.58
MSX1-201ENST00000382723 ZPBPQ9BS86 351 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 LMF2Q9BU23 707 aaKnown RBP24.92■■□□□ 1.58
MSX1-201ENST00000382723 IL1RAPQ9NPH3 570 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 MKLN1Q9UL63 735 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 CLOCKO15516 846 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 NKX2-2O95096 273 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 ZIC2O95409 532 aaPredicted RBP24.92■■□□□ 1.58
MSX1-201ENST00000382723 CST1P01037 141 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 FABP3P05413 133 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 OR1E2P47887 323 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 VLDLRP98155 873 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 OGFRL1Q5TC84 451 aaPredicted RBP24.92■■□□□ 1.58
MSX1-201ENST00000382723 PRAMEF8Q5VWM4 474 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 PRAMEF7Q5VXH5 474 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 FAM198BQ6UWH4 519 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 OR14A16Q8NHC5 309 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 CENPNQ96H22 339 aaPredicted RBP24.92■■□□□ 1.58
MSX1-201ENST00000382723 VPS50Q96JG6 964 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 SDF2Q99470 211 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 DDA1Q9BW61 102 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 WDFY3Q8IZQ1 3526 aa24.92■■□□□ 1.58
MSX1-201ENST00000382723 ZFHX2Q9C0A1 2572 aaPredicted RBP24.91■■□□□ 1.58
MSX1-201ENST00000382723 C9J4A7 227 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 SLC37A1P57057 533 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 POU6F2P78424 691 aaPredicted RBP24.91■■□□□ 1.58
MSX1-201ENST00000382723 NNATQ16517 81 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 IFI44LQ53G44 452 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 SFT2D3Q587I9 215 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 FIGNL1Q6PIW4 674 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 ZNF721Q8TF20 911 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 EME1Q96AY2 570 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 BTBD2Q9BX70 525 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 RSPO3Q9BXY4 272 aaPredicted RBP24.91■■□□□ 1.58
MSX1-201ENST00000382723 ITPAQ9BY32 194 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 KLHL4Q9C0H6 718 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 ABCG2Q9UNQ0 655 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 SATB2Q9UPW6 733 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 SH3GLB1Q9Y371 365 aa24.91■■□□□ 1.58
MSX1-201ENST00000382723 SAC3D1A6NKF1 404 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 ETS2P15036 469 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 HOXB6P17509 224 aaKnown RBP24.9■■□□□ 1.58
MSX1-201ENST00000382723 CD247P20963 164 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 MAGEA2P43356 314 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 LIMK1P53667 647 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 EIF3IQ13347 325 aaKnown RBP24.9■■□□□ 1.58
MSX1-201ENST00000382723 CHDHQ8NE62 594 aaPredicted RBP24.9■■□□□ 1.58
MSX1-201ENST00000382723 HOXB13Q92826 284 aaPredicted RBP24.9■■□□□ 1.58
MSX1-201ENST00000382723 ZG16BQ96DA0 208 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 RMND5BQ96G75 393 aaPredicted RBP24.9■■□□□ 1.58
MSX1-201ENST00000382723 CIB1Q99828 191 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 WDR54Q9H977 334 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 FBXO34Q9NWN3 711 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 PRODH2Q9UF12 536 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 WDR45Q9Y484 360 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 AK5Q9Y6K8 562 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 C9orf172C9J069 976 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 PRKNO60260 465 aaPredicted RBP24.9■■□□□ 1.58
MSX1-201ENST00000382723 DEAF1O75398 565 aaPredicted RBP24.9■■□□□ 1.58
MSX1-201ENST00000382723 DIRAS1O95057 198 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 IGKV3-11P04433 115 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 RFX3P48380 749 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 NPSR1Q6W5P4 371 aa24.9■■□□□ 1.58
MSX1-201ENST00000382723 FRRS1Q6ZNA5 592 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms