RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 TNIP2Q8NFZ5 429 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 MBD3L2Q8NHZ7 208 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-202ENST00000381208 FAM76AQ8TAV0 307 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 WDYHV1Q96HA8 205 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 METTL2AQ96IZ6 378 aaKnown RBP11.84□□□□□ -0.51
RPAIN-202ENST00000381208 HBEGFQ99075 208 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 SH3GL2Q99962 352 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 ACPTQ9BZG2 426 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 OR2B2Q9GZK3 357 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 PPCSQ9HAB8 311 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 SLC35C2Q9NQQ7 365 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 DNAJB12Q9NXW2 375 aaKnown RBP11.84□□□□□ -0.51
RPAIN-202ENST00000381208 SENP1Q9P0U3 644 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 SLC6A5Q9Y345 797 aa11.84□□□□□ -0.51
RPAIN-202ENST00000381208 MRPS18CQ9Y3D5 142 aaKnown RBP11.84□□□□□ -0.51
RPAIN-202ENST00000381208 ABCA4P78363 2273 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 AKAP6Q13023 2319 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 UGT2B11O75310 529 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 CHMP24386 653 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 GCAP28676 217 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 IL12BP29460 328 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 SRD5A2P31213 254 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 PNLIPRP2P54317 469 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 MRPS35P82673 323 aaKnown RBP11.83□□□□□ -0.52
RPAIN-202ENST00000381208 WIPI1Q5MNZ9 446 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-202ENST00000381208 PLCZ1Q86YW0 608 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 FAM9CQ8IZT9 166 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 MMP21Q8N119 569 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 C16orf78Q8WTQ4 265 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 TMBIM1Q969X1 311 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 C11orf24Q96F05 449 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-202ENST00000381208 UCN2Q96RP3 112 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 TRIB1Q96RU8 372 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 NODALQ96S42 347 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 TM9SF2Q99805 663 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 POLDIP3Q9BY77 421 aaKnown RBP11.83□□□□□ -0.52
RPAIN-202ENST00000381208 HEY2Q9UBP5 337 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 GRID1Q9ULK0 1009 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 FREM3P0C091 2139 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 MED13LQ71F56 2210 aa11.83□□□□□ -0.52
RPAIN-202ENST00000381208 A0A087WV62 115 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 FAM221AA4D161 298 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 GLRA3O75311 464 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 ERN1O75460 977 aaKnown RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 ANXA4P09525 319 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 DDCP20711 480 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 DNAJA1P31689 397 aaKnown RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 SOX18P35713 384 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 PTGDSP41222 190 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 ZNF136P52737 540 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 ART1P52961 327 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 NAGLUP54802 743 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 HMGCS1Q01581 520 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 ZNF763Q0D2J5 394 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 GAB1Q13480 694 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 SLC29A2Q14542 456 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 DAZAP2Q15038 168 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 LTB4RQ15722 352 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 IMPG1Q17R60 797 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 CCDC153Q494R4 210 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 TCHHL1Q5QJ38 904 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 ARHGAP21Q5T5U3 1957 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 YRDCQ86U90 279 aaKnown RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 IFNEQ86WN2 208 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 ZZZ3Q8IYH5 903 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 EIF1ADQ8N9N8 165 aaKnown RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 NAXEQ8NCW5 288 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 CHDHQ8NE62 594 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 OR9A2Q8NGT5 310 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 OR14L1PQ8NHC6 308 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 GOT1L1Q8NHS2 421 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 EXOSC8Q96B26 276 aaKnown RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 APIPQ96GX9 242 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 VSTM2LQ96N03 204 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 BBS4Q96RK4 519 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 FOXC2Q99958 501 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 SFXN3Q9BWM7 321 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 CLEC4MQ9H2X3 399 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 HHATLQ9HCP6 504 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 SERHLQ9NQF3 203 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 RASSF1Q9NS23 344 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 CRIM1Q9NZV1 1036 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 MRTO4Q9UKD2 239 aaKnown RBP11.82□□□□□ -0.52
RPAIN-202ENST00000381208 MAPRE3Q9UPY8 281 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 WIF1Q9Y5W5 379 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 CELSR1Q9NYQ6 3014 aa11.82□□□□□ -0.52
RPAIN-202ENST00000381208 TUBAL3A6NHL2 446 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 TTC36A6NLP5 189 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 A6NNC1 897 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 CRCPO75575 148 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 IFI6P09912 130 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 TMIGD3P0DMS9 266 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-202ENST00000381208 CT45A8P0DMV1 189 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 CT45A9P0DMV2 189 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 MYL2P10916 166 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 CHN1P15882 459 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 CCT5P48643 541 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 RAE1P78406 368 aaKnown RBP11.81□□□□□ -0.52
RPAIN-202ENST00000381208 DUSP2Q05923 314 aa11.81□□□□□ -0.52
RPAIN-202ENST00000381208 BCL2A1Q16548 175 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms