RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 SLC22A3O75751 556 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 OR2A4O95047 310 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 VIPP01282 170 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 HGFP14210 728 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 BPIP17213 487 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 RAB4AP20338 218 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 WARSP23381 471 aaKnown RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 MPGP29372 298 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 LCN1P31025 176 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 KIR3DL2P43630 455 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 GCGRP47871 477 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 NRG1Q02297 640 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 SPDYE7PQ495Y7 208 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 C9orf57Q5W0N0 161 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 OR2T5Q6IEZ7 315 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 ANKRD33Q7Z3H0 272 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 CIR1Q86X95 450 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 KDF1Q8NAX2 398 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 OR2T29Q8NH02 315 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 ZBED3Q96IU2 234 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 FCRL2Q96LA5 508 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF354BQ96LW1 612 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 OR2A7Q96R45 310 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 PFDN5Q99471 154 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 TBL1YQ9BQ87 522 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 TMEM106CQ9BVX2 250 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 GPR61Q9BZJ8 451 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 METTL9Q9H1A3 318 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 RIMS4Q9H426 269 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 PLXNA3P51805 1871 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 FRMPD3Q5JV73 1810 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 TRBV23OR9-2A0A075B6M9 112 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 HMSDA8MTL9 139 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 PSMD3O43242 534 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 SMAD6O43541 496 aaKnown RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 SOCS5O75159 536 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 LY86O95711 162 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF682O95780 498 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 S100A9P06702 114 aaKnown RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 IQCF3P0C7M6 154 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 SLC2A1P11166 492 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 IRS1P35568 1242 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 SOX3P41225 446 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 CTSOP43234 321 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 PITX1P78337 314 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 TNFRSF17Q02223 184 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 LAPTM4AQ15012 233 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 CCL14Q16627 93 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 USP39Q53GS9 565 aaKnown RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 KRBOX4Q5JUW0 171 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 DGKKQ5KSL6 1271 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 CDPF1Q6NVV7 123 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 Q6ZPB1 254 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 HFE2Q6ZVN8 426 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 PLPPR4Q7Z2D5 763 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 PDZD3Q86UT5 571 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF567Q8N184 647 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 SPICQ8N5J4 248 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 C2CD4AQ8NCU7 369 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 C19orf18Q8NEA5 215 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 KHSRPQ92945 711 aaKnown RBP eCLIP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF707Q96C28 371 aaPredicted RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 SMARCD1Q96GM5 515 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF599Q96NL3 588 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 DDOQ99489 341 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 EPYCQ99645 322 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 SEMA3CQ99985 751 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 ANKRA2Q9H9E1 313 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 EXOSC4Q9NPD3 245 aaKnown RBP6.22□□□□□ -1.41
RIPK1-202ENST00000380409 FBXL3Q9UKT7 428 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 GAB2Q9UQC2 676 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 MED16Q9Y2X0 877 aa6.22□□□□□ -1.41
RIPK1-202ENST00000380409 CPSF4O95639 269 aaKnown RBP6.21□□□□□ -1.41
RIPK1-202ENST00000380409 FGF19O95750 216 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 NMBRP28336 390 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 RGS4P49798 205 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 SIM1P81133 766 aaPredicted RBP6.21□□□□□ -1.41
RIPK1-202ENST00000380409 HGFACQ04756 655 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 MBTD1Q05BQ5 628 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 ATP6AP1LQ52LC2 224 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF648Q5T619 568 aaPredicted RBP6.21□□□□□ -1.41
RIPK1-202ENST00000380409 AFMIDQ63HM1 303 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 PLAG1Q6DJT9 500 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 HAGHLQ6PII5 290 aaPredicted RBP6.21□□□□□ -1.41
RIPK1-202ENST00000380409 PDZD9Q8IXQ8 264 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF687Q8N1G0 1237 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 PTGR2Q8N8N7 351 aaPredicted RBP6.21□□□□□ -1.41
RIPK1-202ENST00000380409 ZNF527Q8NB42 609 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 SCAMP5Q8TAC9 235 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 METTL6Q8TCB7 284 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 NETO1Q8TDF5 533 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 MS4A4AQ96JQ5 239 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 RHOVQ96L33 236 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 RASL12Q9NYN1 266 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 CFAP97Q9P2B7 532 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 LIMD1Q9UGP4 676 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 NDOR1Q9UHB4 597 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 DUSP12Q9UNI6 340 aa6.21□□□□□ -1.41
RIPK1-202ENST00000380409 CHTOPQ9Y3Y2 248 aaKnown RBP6.21□□□□□ -1.41
RIPK1-202ENST00000380409 TMEM229AB2RXF0 380 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms