RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 SPATA13Q96N96 652 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 CASD1Q96PB1 797 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 GPR22Q99680 433 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 THUMPD3Q9BV44 507 aaKnown RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ELOVL4Q9GZR5 314 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 GABARAPL1Q9H0R8 117 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 SLC38A1Q9H2H9 487 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 CHRDQ9H2X0 955 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 TMPRSS4Q9NRS4 437 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 ACSS1Q9NUB1 689 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-204ENST00000380393 C2orf42Q9NWW7 574 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 DOCK3Q8IZD9 2030 aa8.86□□□□□ -0.99
PTPRA-204ENST00000380393 A8MT66 165 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 UBFD1O14562 309 aaKnown RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 DLEU1O43261 78 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 DPM1O60762 260 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 SMPD2O60906 423 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 FZD7O75084 574 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 IGF2P01344 180 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 PMP2P02689 132 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 SCG5P05408 212 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 AKAP5P24588 427 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 GMFBP60983 142 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 DOC2BQ14184 412 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 TOMM34Q15785 309 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 C1orf185Q5T7R7 199 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF660Q6AZW8 331 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 B3GLCTQ6Y288 498 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 UBAC2Q8NBM4 344 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 B3GNT7Q8NFL0 401 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 TM9SF4Q92544 642 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM203Q969S6 136 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF583Q96ND8 569 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 SMOC1Q9H4F8 434 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 EXOSC3Q9NQT5 275 aaKnown RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF629Q9UEG4 869 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 TSPAN16Q9UKR8 245 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 NPTNQ9Y639 398 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 NINQ8N4C6 2090 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 A6NJY4 79 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 MID1O15344 667 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 CRHP06850 196 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 LINC00032P0C843 101 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 SMPD1P17405 629 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 ITGB7P26010 798 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 PTPN6P29350 595 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 MAT2AP31153 395 aaKnown RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 CTSOP43234 321 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 CLDN10P78369 228 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 CDK6Q00534 326 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 SEMG2Q02383 582 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 BOP1Q14137 746 aaKnown RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 PTRHD1Q6GMV3 140 aaKnown RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 ACSM5Q6NUN0 579 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 CASP12Q6UXS9 341 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 QSOX2Q6ZRP7 698 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 TWIST2Q8WVJ9 160 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 TMEM176AQ96HP8 235 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 C5orf34Q96MH7 638 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 GINS4Q9BRT9 223 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 ARHGAP39Q9C0H5 1083 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 PRDM12Q9H4Q4 367 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 GKN1Q9NS71 199 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 MS4A12Q9NXJ0 267 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 DNAJC15Q9Y5T4 150 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 SOWAHBA6NEL2 793 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 LANCL1O43813 399 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 ADH1AP07327 375 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 CXCL8P10145 99 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 DRD2P14416 443 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 IFNGR1P15260 489 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 LHX1P48742 406 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 SERINC3Q13530 473 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 HTR4Q13639 388 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 OR2T5Q6IEZ7 315 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 RASGEF1AQ8N9B8 481 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 OR2T29Q8NH02 315 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 ISG20Q96AZ6 181 aaKnown RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 R3HDM4Q96D70 268 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 HRASLS5Q96KN8 279 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 PIGMQ9H3S5 423 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 JPH1Q9HDC5 661 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-204ENST00000380393 NKIRAS2Q9NYR9 191 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 NTMQ9P121 344 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 ACSL6Q9UKU0 697 aa8.85□□□□□ -0.99
PTPRA-204ENST00000380393 M0R129 80 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 RHOP08100 348 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 ANKRD34CP0C6C1 535 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 USP17L7P0C7H9 530 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 ODC1P11926 461 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 ZNF35P13682 527 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 GIFP27352 417 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 MATKP42679 507 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 BDKRB1P46663 353 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 EVX1P49640 407 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 PRR5P85299 388 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 RBM39Q14498 530 aaKnown RBP8.84□□□□□ -0.99
PTPRA-204ENST00000380393 SLC14A2Q15849 920 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 GSG1Q2KHT4 349 aa8.84□□□□□ -0.99
PTPRA-204ENST00000380393 GPR149Q86SP6 731 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms