RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 UBQLNLQ8IYU4 475 aa20.95■□□□□ 0.94
U2AF1-202ENST00000380276 C1orf52Q8N6N3 182 aaKnown RBP20.95■□□□□ 0.94
U2AF1-202ENST00000380276 CNRIP1Q96F85 164 aaPredicted RBP20.95■□□□□ 0.94
U2AF1-202ENST00000380276 NMRK1Q9NWW6 199 aa20.95■□□□□ 0.94
U2AF1-202ENST00000380276 VPS13CQ709C8 3753 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 A0A1W2PNV4 684 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 OR6C70A6NIJ9 312 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 A8MXE2 369 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 NME6O75414 186 aaPredicted RBP20.94■□□□□ 0.94
U2AF1-202ENST00000380276 OTCP00480 354 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 INHBAP08476 426 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 CASQ1P31415 396 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 CDH13P55290 713 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 EEF1A1P68104 462 aaKnown RBP20.94■□□□□ 0.94
U2AF1-202ENST00000380276 SLC7A5Q01650 507 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 ERCC6LQ2NKX8 1250 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 GGTA1PQ4G0N0 100 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 EEF1A1P5Q5VTE0 462 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 FAM219BQ5XKK7 198 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 ADGRE4PQ86SQ3 457 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 CCDC116Q8IYX3 515 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 OR4K17Q8NGC6 315 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 KAT2AQ92830 837 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 G6PC3Q9BUM1 346 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 UBTD1Q9HAC8 227 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 KLHL28Q9NXS3 571 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 TESMINQ9Y4I5 508 aa20.94■□□□□ 0.94
U2AF1-202ENST00000380276 A0A1B0GTL3 188 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 TO15178 435 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 TGM6O95932 706 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 SIRPAP78324 504 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 FAM27E3Q08E93 113 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 EFR3AQ14156 821 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 TSNAXIP1Q2TAA8 658 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 LETMD1Q6P1Q0 360 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 LARP4Q71RC2 724 aaKnown RBP eCLIP20.93■□□□□ 0.94
U2AF1-202ENST00000380276 ZNF592Q92610 1267 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 EXOSC8Q96B26 276 aaKnown RBP20.93■□□□□ 0.94
U2AF1-202ENST00000380276 CTHRC1Q96CG8 243 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 PIK3IP1Q96FE7 263 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 UCN2Q96RP3 112 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 BRF2Q9HAW0 419 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 NINJ2Q9NZG7 142 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 SENP1Q9P0U3 644 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 DLGAP4Q9Y2H0 992 aa20.93■□□□□ 0.94
U2AF1-202ENST00000380276 GPR55Q9Y2T6 319 aaPredicted RBP20.93■□□□□ 0.94
U2AF1-202ENST00000380276 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 FAM171A2A8MVW0 826 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 PPP6CO00743 305 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 TNFSF13O75888 250 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 BCAS2O75934 225 aaPredicted RBP20.92■□□□□ 0.94
U2AF1-202ENST00000380276 HEXAP06865 529 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 ZNF708P17019 499 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 GRK2P25098 689 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 DPP4P27487 766 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 CLDN18P56856 261 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 CORO7P57737 925 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 TEX35Q5T0J7 233 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 UBAP2Q5T6F2 1119 aaKnown RBP20.92■□□□□ 0.94
U2AF1-202ENST00000380276 CXorf67Q86X51 503 aaPredicted RBP20.92■□□□□ 0.94
U2AF1-202ENST00000380276 OR9A2Q8NGT5 310 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 NUDT8Q8WV74 236 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 SLC35A4Q96G79 324 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 LRRC1Q9BTT6 524 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 MED18Q9BUE0 208 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 ACSS3Q9H6R3 686 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 ZNF226Q9NYT6 803 aa20.92■□□□□ 0.94
U2AF1-202ENST00000380276 SLC22A20A6NK97 555 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 MSTNO14793 375 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 SMAD7O15105 426 aaKnown RBP20.91■□□□□ 0.94
U2AF1-202ENST00000380276 SCO2O43819 266 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 OR4F21O95013 312 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 IL3P08700 152 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 RPS17P08708 135 aaKnown RBP20.91■□□□□ 0.94
U2AF1-202ENST00000380276 KCNJ5P48544 419 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 TRA2BP62995 288 aaKnown RBP20.91■□□□□ 0.94
U2AF1-202ENST00000380276 ZNF628Q5EBL2 1059 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 OR2A2Q6IF42 318 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 VWA1Q6PCB0 445 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 ZNF483Q8TF39 744 aaPredicted RBP20.91■□□□□ 0.94
U2AF1-202ENST00000380276 EFHD2Q96C19 240 aaPredicted RBP20.91■□□□□ 0.94
U2AF1-202ENST00000380276 ZNF681Q96N22 645 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 CCL19Q99731 98 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 GIMAP4Q9NUV9 329 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 PPP4R1LQ9P1A2 415 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 HEY2Q9UBP5 337 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 OR10H1Q9Y4A9 318 aa20.91■□□□□ 0.94
U2AF1-202ENST00000380276 H7C1Q1 480 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 TSPAN2O60636 221 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 TCHHL1Q5QJ38 904 aaPredicted RBP20.9■□□□□ 0.94
U2AF1-202ENST00000380276 SH2D4BQ5SQS7 431 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 RAET1LQ5VY80 246 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 C8orf74Q6P047 294 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 SLC44A2Q8IWA5 706 aaPredicted RBP20.9■□□□□ 0.94
U2AF1-202ENST00000380276 MEIOBQ8N635 442 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 CDYL2Q8N8U2 506 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 ZNF675Q8TD23 568 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 ANP32BQ92688 251 aaKnown RBP20.9■□□□□ 0.94
U2AF1-202ENST00000380276 PIGTQ969N2 578 aa20.9■□□□□ 0.94
U2AF1-202ENST00000380276 PGM2Q96G03 612 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms