RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 FAM111AQ96PZ2 611 aa22.53■■□□□ 1.2
TNFRSF4-201ENST00000379236 ADOQ96SZ5 270 aa22.53■■□□□ 1.2
TNFRSF4-201ENST00000379236 EML4Q9HC35 981 aaKnown RBP22.53■■□□□ 1.2
TNFRSF4-201ENST00000379236 C2orf72A6NCS6 295 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 TOXO94900 526 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 MC3RP41968 323 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 CRYZQ08257 329 aaKnown RBP22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 WIPI1Q5MNZ9 446 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 SH2D4BQ5SQS7 431 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 RIPPLY2Q5TAB7 128 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 EMBQ6PCB8 327 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 TMEM107Q6UX40 140 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 LARP4Q71RC2 724 aaKnown RBP eCLIP22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 WDR53Q7Z5U6 358 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 CLYBLQ8N0X4 340 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 BANPQ8N9N5 519 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 SLC35A4Q96G79 324 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 VSTM2LQ96N03 204 aa22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 ROPN1BQ9BZX4 212 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 ROPN1Q9HAT0 212 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 DDX18Q9NVP1 670 aaKnown RBP22.52■■□□□ 1.2
TNFRSF4-201ENST00000379236 HSPB2A8KAH6 182 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 SPAG7O75391 227 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 CBR3O75828 277 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 CT45A8P0DMV1 189 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 CT45A9P0DMV2 189 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 PRPH2P23942 346 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 MSX1P28360 303 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 ZNHIT3Q15649 155 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 HSPB2Q16082 182 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 EIPR1Q53HC9 387 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 CT45A2Q5DJT8 189 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 YRDCQ86U90 279 aaKnown RBP22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 DDIASQ8IXT1 998 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 FAM83FQ8NEG4 500 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 OR14L1PQ8NHC6 308 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 ABTB1Q969K4 478 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 C14orf79Q96F83 325 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 LURAP1Q96LR2 239 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 TIMP4Q99727 224 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 SERHLQ9NQF3 203 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 TAS2R7Q9NYW3 318 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 LGALS13Q9UHV8 139 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 EXO1Q9UQ84 846 aaKnown RBP22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 PTGDR2Q9Y5Y4 395 aa22.51■■□□□ 1.19
TNFRSF4-201ENST00000379236 A0A087WV62 115 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 NME6O75414 186 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 SLU7O95391 586 aaKnown RBP22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 ALDH3A1P30838 453 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 GPC1P35052 558 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 ADH7P40394 386 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 PNLIPRP2P54317 469 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 RPL38P63173 70 aaKnown RBP22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 TLE4Q04727 773 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 SLC25A35Q3KQZ1 300 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 NPSR1Q6W5P4 371 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 ZNF295-AS1Q8N0V1 137 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 GFM2Q969S9 779 aaKnown RBP22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 EFHD2Q96C19 240 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 GLIPR2Q9H4G4 154 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 SLC24A3Q9HC58 644 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 WIF1Q9Y5W5 379 aa22.5■■□□□ 1.19
TNFRSF4-201ENST00000379236 PDPK1O15530 556 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 NPHS1O60500 1241 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 TSPAN2O60636 221 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 LINC00032P0C843 101 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 BMP7P18075 431 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 PTGDSP41222 190 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 TFF3Q07654 80 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 GALNTL6Q49A17 601 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 ACSF3Q4G176 576 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 NHSL2Q5HYW2 709 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 KANK2Q63ZY3 851 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 VASNQ6EMK4 673 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 LACC1Q8IV20 430 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 ZFP28Q8NHY6 868 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 TCP10LQ8TDR4 215 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 AENQ8WTP8 325 aaKnown RBP22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 LRRC46Q96FV0 321 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 CCT7Q99832 543 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 UGT2B28Q9BY64 529 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 PRDM14Q9GZV8 571 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 NPDC1Q9NQX5 325 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 SLC17A7Q9P2U7 560 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 DKKL1Q9UK85 242 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 MRTO4Q9UKD2 239 aaKnown RBP22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 C19orf53Q9UNZ5 99 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 CCL27Q9Y4X3 112 aa22.49■■□□□ 1.19
TNFRSF4-201ENST00000379236 EPPINO95925 133 aa22.48■■□□□ 1.19
TNFRSF4-201ENST00000379236 ACTL6AO96019 429 aa22.48■■□□□ 1.19
TNFRSF4-201ENST00000379236 IL2RAP01589 272 aa22.48■■□□□ 1.19
TNFRSF4-201ENST00000379236 HSPB3Q12988 150 aa22.48■■□□□ 1.19
TNFRSF4-201ENST00000379236 RCAN2Q14206 197 aa22.48■■□□□ 1.19
TNFRSF4-201ENST00000379236 PRSS53Q2L4Q9 553 aa22.48■■□□□ 1.19
TNFRSF4-201ENST00000379236 WDR93Q6P2C0 686 aa22.48■■□□□ 1.19
TNFRSF4-201ENST00000379236 IFNEQ86WN2 208 aa22.48■■□□□ 1.19
TNFRSF4-201ENST00000379236 PLCZ1Q86YW0 608 aa22.48■■□□□ 1.19
TNFRSF4-201ENST00000379236 TWIST2Q8WVJ9 160 aa22.48■■□□□ 1.19
TNFRSF4-201ENST00000379236 CAVIN3Q969G5 261 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms