RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CELP19835 753 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 BTBD16Q32M84 506 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 MEPCEQ7L2J0 689 aaKnown RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PGLYRP2Q96PD5 576 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TIMM22Q9Y584 194 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 HLA-DQB2P05538 268 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 BMPR1AP36894 532 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 CGB2Q6NT52 195 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NRROSQ86YC3 692 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 HUS1BQ8NHY5 278 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 MAP3K3Q99759 626 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SARGQ9BW04 601 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ABT1Q9ULW3 272 aaKnown RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ASGR2P07307 311 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 RAB3BP20337 219 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 RRAS2P62070 204 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 XKR5Q6UX68 686 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TCEAL3Q969E4 200 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 FCRL1Q96LA6 429 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SECISBP2Q96T21 854 aaKnown RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NUDT16L1Q9BRJ7 211 aaKnown RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 C19orf25Q9UFG5 118 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 YKT6O15498 198 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 HOXB1P14653 301 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PPT1P50897 306 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM198Q66K66 360 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 LSMEM2Q8N112 164 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 RSC1A1Q92681 617 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 IGSF21Q96ID5 467 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 UTS2RQ9UKP6 389 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NFYBP25208 207 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 CLCN7P51798 805 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 H3F3CQ6NXT2 135 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM220Q6QAJ8 160 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PHACTR4Q8IZ21 702 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 OR5M3Q8NGP4 307 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 EIF4E2O60573 245 aaKnown RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PAK4O96013 591 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 DPPA4Q7L190 304 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ARHGEF39Q8N4T4 335 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SLC16A1P53985 500 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 TAS2R46P59540 309 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 GK2Q14410 553 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 EML3Q32P44 896 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 C17orf99Q6UX52 265 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CNN2Q99439 309 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SGPP1Q9BX95 441 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PCDH8O95206 1070 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PTHP01270 115 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 IKZF1Q13422 519 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 NIPAL3Q6P499 406 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 MS4A4EQ96PG1 132 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CNPPD1Q9BV87 410 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ITPKBP27987 946 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PERM1Q5SV97 790 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 FAM185AQ8N0U4 392 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PARP16Q8N5Y8 322 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SLC5A8Q8N695 610 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 KLHL15Q96M94 604 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CASTOR2A6NHX0 329 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 UGT8Q16880 541 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 FAM71CQ8NEG0 241 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 TCTN2Q96GX1 697 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 HSH2DQ96JZ2 352 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 UQCC2Q9BRT2 126 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 OR51J1Q9H342 316 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF408Q9H9D4 720 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PACSIN3Q9UKS6 424 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ACSL6Q9UKU0 697 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 GABARAPH6UMI1 98 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 GSTZ1O43708 216 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SNAI1O95863 264 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ABHD16AO95870 558 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 A0A1B0GUH1 482 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 H7BY64 318 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SCDO00767 359 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 NARSO43776 548 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 FAM53BQ14153 422 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 KDF1Q8NAX2 398 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 OR2AJ1Q8NGZ0 328 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 STT3BQ8TCJ2 826 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CCDC86Q9H6F5 360 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 RAB22AQ9UL26 194 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ENPP3O14638 875 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 OR1F1O43749 312 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 MTM1Q13496 603 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 MEP1AQ16819 746 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 A0A1B0GTW7 788 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 NDUFB2O95178 105 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 IFNA17P01571 189 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PDE7AQ13946 482 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM31Q5JXX7 168 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PIAS4Q8N2W9 510 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ACVR1CQ8NER5 493 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 B3GAT2Q9NPZ5 323 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 LAMP3Q9UQV4 416 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CXCR1P25024 350 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CA5AP35218 305 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CTNNB1P35222 781 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 DAP3P51398 398 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms