RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 SLC7A2P52569 658 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 CCL14Q16627 93 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 SHROOM1Q2M3G4 852 aaPredicted RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 PARP6Q2NL67 630 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ANKRD55Q3KP44 614 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 C9orf66Q5T8R8 295 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 EMBQ6PCB8 327 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ADAMTSL5Q6ZMM2 481 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 Q6ZVH6 145 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 MOB2Q70IA6 237 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 PHC2Q8IXK0 858 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 BCORP1Q8N888 145 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 C4orf32Q8N8J7 132 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF491Q8N8L2 437 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 LHX4Q969G2 390 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 BIRC7Q96CA5 298 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 CPXM1Q96SM3 734 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ST6GALNAC5Q9BVH7 336 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 GPR174Q9BXC1 333 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 DPH5Q9H2P9 285 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ECT2Q9H8V3 914 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 STARD5Q9NSY2 213 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF446Q9NWS9 450 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 RCOR3Q9P2K3 495 aaPredicted RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 FZR1Q9UM11 496 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 MGAT4BQ9UQ53 548 aa1.64□□□□□ -2.15
VPS13A-206ENST00000376646 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.64□□□□□ -2.15
VPS13A-206ENST00000376646 A0A0U1RQV5 110 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 BCLAF3A2AJT9 711 aaKnown RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 F8WDY8 70 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 H0YL77 283 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 PDXKO00764 312 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 SDC3O75056 442 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 VPS26AO75436 327 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 TOM1L1O75674 476 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 GUCA1CO95843 209 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 IGSF6O95976 241 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 AK1P00568 194 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 RENP00797 406 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 THY1P04216 161 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 PTMAP06454 111 aaKnown RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 HCKP08631 526 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 CYP2F1P24903 491 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 PTPN6P29350 595 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 PRELPP51888 382 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 VCPP55072 806 aaKnown RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 HAND2P61296 217 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 HERVK_113P63132 956 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ERVK-8P63133 956 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 KLHL30Q0D2K2 578 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 PDZK1IP1Q13113 114 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ADPRMQ3LIE5 342 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ACSF3Q4G176 576 aaPredicted RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 HSP90AA5PQ58FG0 334 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 BEND6Q5SZJ8 279 aaPredicted RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 APOOLQ6UXV4 268 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 PRSS48Q7RTY5 328 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 P4HA3Q7Z4N8 544 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 RANBP3LQ86VV4 465 aaPredicted RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 MISPQ8IVT2 679 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 CERS5Q8N5B7 392 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ARFGAP2Q8N6H7 521 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 NTNG2Q96CW9 530 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 TSPAN18Q96SJ8 248 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ERVK-6Q9BXR3 956 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ESM1Q9NQ30 184 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 POLE3Q9NRF9 147 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 FAM114A2Q9NRY5 505 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ATXN10Q9UBB4 475 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF490Q9ULM2 529 aaPredicted RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 SPATA2Q9UM82 520 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 IGHV3-16A0A0C4DH30 117 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 A0A1B0GTH9 108 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 IMPA2O14732 288 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 MCF2LO15068 1137 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 LANCL1O43813 399 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 PDE5AO76074 875 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 GOT2P00505 430 aaKnown RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 MT-ND1P03886 318 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 HEXBP07686 556 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 GSTT2P0CG29 244 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 GSTT2BP0CG30 244 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF19P17023 458 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ZBTB25P24278 435 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 PPP2R1BP30154 601 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 HTR5AP47898 357 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 HSF2Q03933 536 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 BNIP1Q12981 228 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 SCGB2A2Q13296 93 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 CYLC2Q14093 348 aaPredicted RBP1.63□□□□□ -2.15
VPS13A-206ENST00000376646 CD226Q15762 336 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 PCK2Q16822 640 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ACER2Q5QJU3 275 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 SEL1L2Q5TEA6 688 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 TAF3Q5VWG9 929 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 FAM219BQ5XKK7 198 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 REP15Q6BDI9 236 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ARMCX5Q6P1M9 558 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 RFWD3Q6PCD5 774 aa1.63□□□□□ -2.15
VPS13A-206ENST00000376646 ATRAIDQ6UW56 229 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms