RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 LDAHQ9H6V9 325 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 FTSJ1Q9UET6 329 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 NME7Q9Y5B8 376 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 PHIPQ8WWQ0 1821 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 WASHC1A8K0Z3 465 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 CCNOP22674 350 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 VAMP1P23763 118 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 PDX1P52945 283 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 CLRN1P58418 232 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 TRAM1Q15629 374 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 WASH2PQ6VEQ5 465 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 SLC37A3Q8NCC5 494 aa12.89□□□□□ -0.35
C9orf47-203ENST00000375851 INSM2Q96T92 566 aaPredicted RBP12.89□□□□□ -0.35
C9orf47-203ENST00000375851 COL22A1Q8NFW1 1626 aaPredicted RBP12.89□□□□□ -0.35
C9orf47-203ENST00000375851 OR14I1A6ND48 311 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 CACNG3O60359 315 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 ARNTP27540 789 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 TAP2Q03519 686 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 LSAMPQ13449 338 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 SELPLGQ14242 412 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 ABCA11PQ4W5N1 156 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 CCDC80Q76M96 950 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 MAVSQ7Z434 540 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 TMED4Q7Z7H5 227 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 ISL2Q96A47 359 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 KIAA1143Q96AT1 154 aaPredicted RBP12.88□□□□□ -0.35
C9orf47-203ENST00000375851 SAMD8Q96LT4 415 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 EPHA6Q9UF33 1036 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 CD8B2A6NJW9 211 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 H0YIV9 168 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 H2BFMP0C1H6 154 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 CD8BP10966 210 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 F3P13726 295 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 EN2P19622 333 aaPredicted RBP12.88□□□□□ -0.35
C9orf47-203ENST00000375851 POU4F2Q12837 409 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 MAD2L1BPQ15013 274 aaPredicted RBP12.88□□□□□ -0.35
C9orf47-203ENST00000375851 DEFB133Q30KQ1 61 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 ZNF791Q3KP31 576 aaPredicted RBP12.88□□□□□ -0.35
C9orf47-203ENST00000375851 GLT8D1Q68CQ7 371 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 LRFN4Q6PJG9 635 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 PHOX2BQ99453 314 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 SMURF1Q9HCE7 757 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 PRSS16Q9NQE7 514 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 C14orf119Q9NWQ9 140 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 KLF15Q9UIH9 416 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 LRRN3E7EW58 273 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 SGK494L7N484 410 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 UBFD1O14562 309 aaKnown RBP12.88□□□□□ -0.35
C9orf47-203ENST00000375851 KDM4BO94953 1096 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 RLN2P04090 185 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 GNAO1P09471 354 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 GRPRP30550 384 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 BMXP51813 675 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 AP2S1P53680 142 aaPredicted RBP12.88□□□□□ -0.35
C9orf47-203ENST00000375851 SYCE2Q6PIF2 218 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 CBLL1Q75N03 491 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 NAXEQ8NCW5 288 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 TOR1AIP2Q8NFQ8 470 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 OR6C4Q8NGE1 309 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 TRUB1Q8WWH5 349 aaKnown RBP12.88□□□□□ -0.35
C9orf47-203ENST00000375851 BEX2Q9BXY8 128 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 HOXD1Q9GZZ0 328 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 LRRN3Q9H3W5 708 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 BEX1Q9HBH7 125 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 STARD5Q9NSY2 213 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 CPNE7Q9UBL6 633 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 CA5BQ9Y2D0 317 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 LDB3O75112 727 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 MMP12P39900 470 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 SGCAQ16586 387 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 GGTA1PQ4G0N0 100 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 ANKK1Q8NFD2 765 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 TANKQ92844 425 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 UHRF1Q96T88 793 aaPredicted RBP12.88□□□□□ -0.35
C9orf47-203ENST00000375851 TRPV4Q9HBA0 871 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 RXFP3Q9NSD7 469 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 MED11Q9P086 117 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 STUB1Q9UNE7 303 aa12.88□□□□□ -0.35
C9orf47-203ENST00000375851 INMT-MINDY4F8WBC2 141 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 CASC3O15234 703 aaKnown RBP12.87□□□□□ -0.35
C9orf47-203ENST00000375851 FMO6PO60774 539 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 YES1P07947 543 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 TRA2BP62995 288 aaKnown RBP12.87□□□□□ -0.35
C9orf47-203ENST00000375851 ZC3H14Q6PJT7 736 aaKnown RBP12.87□□□□□ -0.35
C9orf47-203ENST00000375851 IL22RA1Q8N6P7 574 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 OR2T11Q8NH01 316 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 WDR20Q8TBZ3 569 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 OR1F2PQ96R84 312 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 PINK1Q9BXM7 581 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 DPH1Q9BZG8 443 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 KCMF1Q9P0J7 381 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 BAIAP2Q9UQB8 552 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 PCDHGA8Q9Y5G5 932 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 PCDHA9Q9Y5H5 950 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 LOC100509620A0A075B734 347 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 SLC9B1P1A6NJY1 282 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 B4GAT1O43505 415 aa12.87□□□□□ -0.35
C9orf47-203ENST00000375851 FARS2O95363 451 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms