RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 WDR92Q96MX6 357 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 FCRL4Q96PJ5 515 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 TMEM168Q9H0V1 697 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 NARFLQ9H6Q4 476 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 ZSCAN32Q9NX65 697 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 CLDND1Q9NY35 253 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 TAS2R16Q9NYV7 291 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 OR6C2Q9NZP2 312 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 MKLN1Q9UL63 735 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 M0R129 80 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 ASGR2P07307 311 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 HSMCR30P0CW71 290 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 DGKEP52429 567 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 UGT2B15P54855 530 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 SNRPD2P62316 118 aaKnown RBP13.14□□□□□ -0.31
MSH5-202ENST00000375740 TFF2Q03403 129 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 DOC2BQ14184 412 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 DGLUCYQ7Z3D6 616 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 RAB43Q86YS6 212 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 CCDC28AQ8IWP9 274 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 TRIM48Q8IWZ4 208 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 UBE2J2Q8N2K1 259 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 KCT2Q8NC54 265 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 DENND6BQ8NEG7 585 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 SEMA3GQ9NS98 782 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 MAT2BQ9NZL9 334 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 CES1P1Q9UKY3 287 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 TMCC3Q9ULS5 477 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 PIAS3Q9Y6X2 628 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 A0A1W2PQ72 361 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 ARRDC5A6NEK1 342 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 CLCA1A8K7I4 914 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 AKR7A2O43488 359 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 NARSO43776 548 aaKnown RBP13.14□□□□□ -0.31
MSH5-202ENST00000375740 SNX4O95219 450 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 RPLP0P05388 317 aaKnown RBP13.14□□□□□ -0.31
MSH5-202ENST00000375740 TNFSF8P32971 234 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 ACTR1BP42025 376 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 ACTR1AP61163 376 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 BTN3A2P78410 334 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 SEC23BQ15437 767 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 TMEM92Q6UXU6 159 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 HMGN2P46Q86SG4 172 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 COMTD1Q86VU5 262 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 PAQR7Q86WK9 346 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 SRFBP1Q8NEF9 429 aaKnown RBP13.14□□□□□ -0.31
MSH5-202ENST00000375740 SLC7A6Q92536 515 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 MYDGFQ969H8 173 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 MAPKAP1Q9BPZ7 522 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 SRMSQ9H3Y6 488 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 IMPAD1Q9NX62 359 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 COQ3Q9NZJ6 369 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 KLF15Q9UIH9 416 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 DUSP12Q9UNI6 340 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 PEX16Q9Y5Y5 336 aa13.14□□□□□ -0.31
MSH5-202ENST00000375740 HMX3A6NHT5 357 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 PROM1O43490 865 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 RASGRP1O95267 797 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 PTHP01270 115 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 HMGN2P05204 90 aaKnown RBP13.13□□□□□ -0.31
MSH5-202ENST00000375740 YES1P07947 543 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 CHMP24386 653 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 POU1F1P28069 291 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 NDUFS1P28331 727 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 ARFIP1P53367 373 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 CRISP1P54107 249 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 STXBP1P61764 594 aaKnown RBP13.13□□□□□ -0.31
MSH5-202ENST00000375740 MADCAM1Q13477 382 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 LASP1Q14847 261 aaKnown RBP13.13□□□□□ -0.31
MSH5-202ENST00000375740 LEXMQ3ZCV2 418 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 FRMPD2BQ6IN97 320 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 SLC48A1Q6P1K1 146 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 TMEM107Q6UX40 140 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 TMEM64Q6YI46 380 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.13□□□□□ -0.31
MSH5-202ENST00000375740 OR4M1Q8NGD0 313 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 TRIM63Q969Q1 353 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 C16orf58Q96GQ5 468 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 GPR83Q9NYM4 423 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 STMN3Q9NZ72 180 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 FTSJ1Q9UET6 329 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 A3GALT2U3KPV4 340 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 A0A0B4J293 547 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 KIAA0513O60268 411 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 APBB3O95704 486 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 CDK1P06493 297 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 H1F0P07305 194 aaKnown RBP13.13□□□□□ -0.31
MSH5-202ENST00000375740 F3P13726 295 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 NDUFV2P19404 249 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 CSNK2A2P19784 350 aaPredicted RBP13.13□□□□□ -0.31
MSH5-202ENST00000375740 ELAVL4P26378 380 aaKnown RBP13.13□□□□□ -0.31
MSH5-202ENST00000375740 PPP2R1BP30154 601 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 TGM4P49221 684 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 KHKP50053 298 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 LIMK1P53667 647 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 DCST1Q5T197 706 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 PAMR1Q6UXH9 720 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 VN1R4Q7Z5H5 301 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 KRT73Q86Y46 540 aa13.13□□□□□ -0.31
MSH5-202ENST00000375740 FAM109AQ8N4B1 249 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms