RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 CTAG2O75638 210 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 ACTL6AO96019 429 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 DDCP20711 480 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 GSTM5P46439 218 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 AGFG1P52594 562 aaKnown RBP12.96□□□□□ -0.34
NELFE-201ENST00000375425 ZNF136P52737 540 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 ZYG11AQ6WRX3 759 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 SPNS3Q6ZMD2 512 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 OR7G2Q8NG99 324 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 OR14L1PQ8NHC6 308 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 RNASE6Q93091 150 aaKnown RBP12.96□□□□□ -0.34
NELFE-201ENST00000375425 LRRC46Q96FV0 321 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 SLC35A4Q96G79 324 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 BBS4Q96RK4 519 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 SH3GL2Q99962 352 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 FOLH1BQ9HBA9 442 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 TAS2R9Q9NYW1 312 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 SENP1Q9P0U3 644 aa12.96□□□□□ -0.34
NELFE-201ENST00000375425 MBD3L4A6NDZ8 208 aaPredicted RBP12.95□□□□□ -0.34
NELFE-201ENST00000375425 MBD3L3A6NE82 208 aaPredicted RBP12.95□□□□□ -0.34
NELFE-201ENST00000375425 MBD3L5A6NJ08 208 aaPredicted RBP12.95□□□□□ -0.34
NELFE-201ENST00000375425 TSPAN2O60636 221 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 GLRA3O75311 464 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 PROCP04070 461 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 SHBGP04278 402 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 CPN1P15169 458 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 GCKP35557 465 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 KRT20P35900 424 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 PEX19P40855 299 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 CCT5P48643 541 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 ASCL1P50553 236 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 ZNF763Q0D2J5 394 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 RCAN2Q14206 197 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 IMPG1Q17R60 797 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 PRSS53Q2L4Q9 553 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 OR5M10Q6IEU7 315 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 NPSR1Q6W5P4 371 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 LARP4Q71RC2 724 aaKnown RBP eCLIP12.95□□□□□ -0.34
NELFE-201ENST00000375425 PLCZ1Q86YW0 608 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 TRIM42Q8IWZ5 723 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 FAM9CQ8IZT9 166 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 OR4N2Q8NGD1 307 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 MBD3L2Q8NHZ7 208 aaPredicted RBP12.95□□□□□ -0.34
NELFE-201ENST00000375425 CDC26Q8NHZ8 85 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 ZPLD1Q8TCW7 415 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 STMN4Q9H169 189 aaPredicted RBP12.95□□□□□ -0.34
NELFE-201ENST00000375425 DNAJB12Q9NXW2 375 aaKnown RBP12.95□□□□□ -0.34
NELFE-201ENST00000375425 TAS2R10Q9NYW0 307 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 CRIM1Q9NZV1 1036 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 GRID1Q9ULK0 1009 aa12.95□□□□□ -0.34
NELFE-201ENST00000375425 MAP1AP78559 2803 aaPredicted RBP12.95□□□□□ -0.34
NELFE-201ENST00000375425 MYO1GB0I1T2 1018 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 PLIN3O60664 434 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 CRCPO75575 148 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 JUNP05412 331 aaKnown RBP12.94□□□□□ -0.34
NELFE-201ENST00000375425 CYP4B1P13584 511 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 CTSSP25774 331 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 IL12BP29460 328 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 DNAJA1P31689 397 aaKnown RBP12.94□□□□□ -0.34
NELFE-201ENST00000375425 SLCO1A2P46721 670 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 NCBP2P52298 156 aaKnown RBP eCLIP12.94□□□□□ -0.34
NELFE-201ENST00000375425 PNLIPRP2P54317 469 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 DNAJB13P59910 316 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 NAA20P61599 178 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 PSG6Q00889 435 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 SRYQ05066 204 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 EFR3AQ14156 821 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 FBXL19-AS1Q494R0 122 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 CCDC153Q494R4 210 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 CFAP157Q5JU67 520 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 FAM71E1Q6IPT2 247 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 ENPP6Q6UWR7 440 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 FRMD7Q6ZUT3 714 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 TRIM46Q7Z4K8 759 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 SLC44A2Q8IWA5 706 aaPredicted RBP12.94□□□□□ -0.34
NELFE-201ENST00000375425 C9orf106Q8NAJ2 232 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 LRRN4CLQ8ND94 238 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.94□□□□□ -0.34
NELFE-201ENST00000375425 EFHD2Q96C19 240 aaPredicted RBP12.94□□□□□ -0.34
NELFE-201ENST00000375425 OR2B2Q9GZK3 357 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 C12orf65Q9H3J6 166 aaKnown RBP12.94□□□□□ -0.34
NELFE-201ENST00000375425 TNFRSF12AQ9NP84 129 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 FBXL2Q9UKC9 423 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 POLR3HQ9Y535 204 aaPredicted RBP12.94□□□□□ -0.34
NELFE-201ENST00000375425 WIF1Q9Y5W5 379 aa12.94□□□□□ -0.34
NELFE-201ENST00000375425 H3BQF6 201 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 SRD5A2P31213 254 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 CRHR1P34998 444 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 OPRM1P35372 400 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 STARP49675 285 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 GFRA1P56159 465 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 PSPHP78330 225 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 IFNEQ86WN2 208 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 EIF1ADQ8N9N8 165 aaKnown RBP12.93□□□□□ -0.34
NELFE-201ENST00000375425 CCDC63Q8NA47 563 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 FAM76AQ8TAV0 307 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 UBLCP1Q8WVY7 318 aaPredicted RBP12.93□□□□□ -0.34
NELFE-201ENST00000375425 MED12Q93074 2177 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 TUBA1CQ9BQE3 449 aa12.93□□□□□ -0.34
NELFE-201ENST00000375425 GPATCH1Q9BRR8 931 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms