RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 CDC42EP4Q9H3Q1 356 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MARCH4Q9P2E8 410 aaPredicted RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 GNG12Q9UBI6 72 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 USP22Q9UPT9 525 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 VWA7Q9Y334 891 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 V9GYS6 101 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 USP42Q9H9J4 1324 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MAGI2Q86UL8 1455 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 VSTM2BA6NLU5 285 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 DBX1A6NMT0 343 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 KLRC4-KLRK1H3BQV0 150 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 J3KRW8 73 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 hCG_2039718K7EN88 272 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MATN3O15232 486 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 DHRS3O75911 302 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 GJB6O95452 261 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 PRAMEF1O95521 474 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 POP4O95707 220 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 ZDHHC11BP0C7U3 371 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 CKMT1AP12532 417 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 RHOQP17081 205 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 NTF3P20783 257 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 RPL35P42766 123 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 NRLP54845 237 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 DOC2BQ14184 412 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 EDDM3AQ14507 147 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MEP1BQ16820 701 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 LHX8Q68G74 356 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 TPRG1Q6ZUI0 275 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 C15orf52Q6ZUT6 534 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 SLC26A9Q7LBE3 791 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 ZSWIM9Q86XI8 627 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 DTX3Q8N9I9 347 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MFSD9Q8NBP5 474 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 HDAC7Q8WUI4 952 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 CYB5D2Q8WUJ1 264 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 FUBP1Q96AE4 644 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 SERINC2Q96SA4 455 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 SYT3Q9BQG1 590 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MRPL13Q9BYD1 178 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 RNF32Q9H0A6 362 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 DDX4Q9NQI0 724 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 SLC2A4RGQ9NR83 387 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 TRNAU1APQ9NX07 287 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MKLN1Q9UL63 735 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 GPR34Q9UPC5 381 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 IGSF1Q8N6C5 1336 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MAP2K7O14733 419 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 NDST3O95803 873 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 RECKO95980 971 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 PRKCGP05129 697 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 BCHEP06276 602 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 CD44P16070 742 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 AOC1P19801 751 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 BCKDHBP21953 392 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 PPIBP23284 216 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 DAP3P51398 398 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MTCP1P56278 107 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 ELF3P78545 371 aaPredicted RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 C3orf67Q6ZVT6 689 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 ADAMTSL2Q86TH1 951 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 LRRC28Q86X40 367 aaPredicted RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 GPR119Q8TDV5 335 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 SGK3Q96BR1 496 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 SLC41A2Q96JW4 573 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 SLC19A3Q9BZV2 496 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 CHRNA10Q9GZZ6 450 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 SLC22A13Q9Y226 551 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 KDM5CP41229 1560 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 RIC1Q4ADV7 1423 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 ANTXRLA6NF34 631 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 PPP1R17O96001 155 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 ELAVL4P26378 380 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 AQP2P41181 271 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 SULT1A2P50226 295 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 RORCP51449 518 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 TAS2R30P59541 319 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 CLEC12BQ2HXU8 276 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 TP53I3Q53FA7 332 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 TUBA3EQ6PEY2 450 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 LINGO4Q6UY18 593 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 B3GNT6Q6ZMB0 384 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 CD163Q86VB7 1156 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 TP53INP2Q8IXH6 220 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MTURNQ8N3F0 131 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 NUP43Q8NFH3 380 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 OR5B3Q8NH48 314 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 DYRK2Q92630 601 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 KLHDC7BQ96G42 594 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 POLDIP3Q9BY77 421 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 MTG2Q9H4K7 406 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 SPAG4Q9NPE6 437 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 IL26Q9NPH9 171 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 AGPAT4Q9NRZ5 378 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 DMAC2Q9NW81 257 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 KCMF1Q9P0J7 381 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 CPSF1Q10570 1443 aaKnown RBP4.43□□□□□ -1.7
SCN1A-202ENST00000375405 M0R135 149 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF195O14628 629 aa4.43□□□□□ -1.7
SCN1A-202ENST00000375405 EFSO43281 561 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms