RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 LDLRAD1Q5T700 205 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 UBTD2Q8WUN7 234 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 ASB11Q8WXH4 323 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 MLXQ9UH92 298 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 PSORS1C1Q9UIG5 152 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 CARNS1A5YM72 827 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 CLDN24A6NM45 220 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 WASHC1A8K0Z3 465 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 C1orf105O95561 183 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 LHCGRP22888 699 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 PYCR1P32322 319 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 SLC19A1P41440 591 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 VIPR2P41587 438 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 SMCO1Q147U7 214 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 HSD17B12Q53GQ0 312 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 KDM4DQ6B0I6 523 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 SLC35F2Q8IXU6 374 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 OR4K13Q8NH42 304 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 TCEAL4Q96EI5 215 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 PLEKHA1Q9HB21 404 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 C14orf105Q9NVL8 296 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 PCDHGB7Q9Y5F8 929 aa6.2□□□□□ -1.42
SMC1A-202ENST00000375340 CLDN4O14493 209 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 RNF13O43567 381 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 TIMP2P16035 220 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CXCR1P25024 350 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SYPL1Q16563 259 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 AGAP7PQ5VUJ5 663 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ASPGQ86U10 573 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 NRSN1Q8IZ57 195 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 LRRC25Q8N386 305 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF350Q9GZX5 532 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ATG5Q9H1Y0 275 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 HPF1Q9NWY4 346 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 HCN3Q9P1Z3 774 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 NUP50Q9UKX7 468 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 TRBV2A0A0J9YWF9 115 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CPNE6O95741 557 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CRYZL1O95825 349 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 GYPBP06028 91 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ANXA3P12429 323 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 GTF2F2P13984 249 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PSMB10P40306 273 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 NRIP1P48552 1158 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CCDC58Q4VC31 144 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 TCEAL5Q5H9L2 206 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SMPDL3BQ92485 455 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ATXN7L1Q9ULK2 861 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 TACSTD2P09758 323 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PGAM2P15259 253 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF20P17024 532 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 IGFALSP35858 605 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PAQR7Q86WK9 346 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CPOQ8IVL8 374 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SYNPOQ8N3V7 929 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SYT14Q8NB59 555 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 OR6N2Q8NGY6 317 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PHOSPHO1Q8TCT1 267 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF419Q96HQ0 510 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF582Q96NG8 517 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 OR4K3Q96R72 315 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PRR14Q9BWN1 585 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 DDX31Q9H8H2 851 aaKnown RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PRRC2BQ5JSZ5 2229 aaKnown RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PRODHO43272 600 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 KRT33AO76009 404 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 HOXD8P13378 290 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 GPR19Q15760 415 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CCDC36Q8IYA8 594 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CYB561A3Q8NBI2 242 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 DNAJA4Q8WW22 397 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 MYNNQ9NPC7 610 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 TMEM45AQ9NWC5 275 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 MARCH5Q9NX47 278 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 KCMF1Q9P0J7 381 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SOBPA7XYQ1 873 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SCDO00767 359 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ANKRD28O15084 1053 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 IGFBP4P22692 258 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ADAM8P78325 824 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 KCNJ10P78508 379 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 CRYZQ08257 329 aaKnown RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SLC5A12Q1EHB4 618 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF750Q32MQ0 723 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 MOAP1Q96BY2 351 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PLCL2Q9UPR0 1127 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 MAB21L2Q9Y586 359 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF831Q5JPB2 1677 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF236Q9UL36 1845 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 PRKYO43930 277 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 AGR2O95994 175 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 SPARCP09486 303 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 ADRB3P13945 408 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 TAS2R43P59537 309 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 MGAT3Q09327 533 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 LIPIQ6XZB0 460 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 TMEM173Q86WV6 379 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-202ENST00000375340 NATD1Q8N6N6 113 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 OR2L3Q8NG85 312 aa6.19□□□□□ -1.42
SMC1A-202ENST00000375340 OR13C3Q8NGS6 347 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms