RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 MYADMQ96S97 322 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 DPH7Q9BTV6 452 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 SFXN1Q9H9B4 322 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 BIN3Q9NQY0 253 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 NDUFAF4Q9P032 175 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 DEC1Q9P2X7 70 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 KCNK7Q9Y2U2 307 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 SNX11Q9Y5W9 270 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 AP1M2Q9Y6Q5 423 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 MPTX1A8MV57 137 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 SSNA1O43805 119 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 ADRB1P08588 477 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 NMBP08949 121 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 CRISP1P54107 249 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 FGL1Q08830 312 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 TCEA2Q15560 299 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 RNLSQ5VYX0 342 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 WASH2PQ6VEQ5 465 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 ASPGQ86U10 573 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 RGL4Q8IZJ4 473 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 OR4C15Q8NGM1 316 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 EEF1AKMT1Q8WVE0 214 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 PANX1Q96RD7 426 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 DPH2Q9BQC3 489 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-203ENST00000375315 SUV39H2Q9H5I1 410 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 ZCCHC4Q9H5U6 513 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 ZNF624Q9P2J8 865 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-203ENST00000375315 DPP7Q9UHL4 492 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 FPGTO14772 594 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 TOXO94900 526 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 CBX7O95931 251 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 SULT1A3P0DMM9 295 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 SULT1A4P0DMN0 295 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 HNMTP50135 292 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 GDI2P50395 445 aaKnown RBP11.46□□□□□ -0.57
C9orf3-203ENST00000375315 TEAD4Q15561 434 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 TAF1AQ15573 450 aaPredicted RBP11.46□□□□□ -0.57
C9orf3-203ENST00000375315 ATAT1Q5SQI0 421 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 ATRAIDQ6UW56 229 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 SERPINA13PQ6UXR4 307 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 MAMSTRQ6ZN01 415 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 ZNF621Q6ZSS3 439 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 MSANTD1Q6ZTZ1 278 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 KRT74Q7RTS7 529 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 SYT14Q8NB59 555 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 SIDT2Q8NBJ9 832 aaKnown RBP11.46□□□□□ -0.57
C9orf3-203ENST00000375315 FZD3Q9NPG1 666 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 DNAJC27Q9NZQ0 273 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 PURGQ9UJV8 347 aaKnown RBP11.46□□□□□ -0.57
C9orf3-203ENST00000375315 A0A0B4J203 849 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 TLR4O00206 839 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 STK25O00506 426 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 SNAPC5O75971 98 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 SNAPINO95295 136 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 LATS1O95835 1130 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 B3GALT4O96024 378 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 LPLP06858 475 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 PRPS2P11908 318 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 DUOXA1Q1HG43 343 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 MPEG1Q2M385 716 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 C2orf27AQ580R0 203 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 FIP1L1Q6UN15 594 aaKnown RBP11.46□□□□□ -0.57
C9orf3-203ENST00000375315 NLRC3Q7RTR2 1065 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 TRIM46Q7Z4K8 759 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 FGD2Q7Z6J4 655 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 CCDC36Q8IYA8 594 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 MOSPD2Q8NHP6 518 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 COQ8AQ8NI60 647 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 TSSK3Q96PN8 268 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 ATF6BQ99941 703 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 SPRTNQ9H040 489 aaPredicted RBP11.46□□□□□ -0.57
C9orf3-203ENST00000375315 ZNF576Q9H609 170 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 BRD9Q9H8M2 597 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 CRLS1Q9UJA2 301 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 FBXL2Q9UKC9 423 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 EDARQ9UNE0 448 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 TMEM5Q9Y2B1 443 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 ANKRD36A6QL64 1941 aa11.46□□□□□ -0.57
C9orf3-203ENST00000375315 EPOP01588 193 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 BPIP17213 487 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 KIR3DL1P43629 444 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 CENPAP49450 140 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 RAB13P51153 203 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 SNRPGP62308 76 aaKnown RBP11.46□□□□□ -0.58
C9orf3-203ENST00000375315 RBBP4Q09028 425 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 CHRNA6Q15825 494 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 C18orf21Q32NC0 220 aaPredicted RBP11.46□□□□□ -0.58
C9orf3-203ENST00000375315 TMIGD1Q6UXZ0 262 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 RNF165Q6ZSG1 346 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 LAS2Q8IYD9 372 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 STK40Q8N2I9 435 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 OR2A12Q8NGT7 310 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 THAP7Q9BT49 309 aaPredicted RBP11.46□□□□□ -0.58
C9orf3-203ENST00000375315 EXTL2Q9UBQ6 330 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 B4GALT6Q9UBX8 382 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 FTSJ1Q9UET6 329 aa11.46□□□□□ -0.58
C9orf3-203ENST00000375315 ZFR2Q9UPR6 939 aaKnown RBP11.46□□□□□ -0.58
C9orf3-203ENST00000375315 COL4A4P53420 1690 aaPredicted RBP11.45□□□□□ -0.58
C9orf3-203ENST00000375315 GBF1Q92538 1859 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms