RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 KCNK12Q9HB15 430 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 SLC25A13Q9UJS0 675 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 SHISA3A0PJX4 238 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 SNTNA6NMZ2 147 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 HMGN4O00479 90 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 PDPK1O15530 556 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 SOD1P00441 154 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 LIMS3P0CW19 117 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 LIMS4P0CW20 117 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 NR2F1P10589 423 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 ACADMP11310 421 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 ZNF30P17039 623 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 RECQLP46063 649 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 COX10Q12887 443 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 TMEM115Q12893 351 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 ZNF791Q3KP31 576 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 TOR2AQ5JU69 321 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 NATD1Q8N6N6 113 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 PPIL3Q9H2H8 161 aaKnown RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 EXTL2Q9UBQ6 330 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 ZNF222Q9UK12 451 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 MYOFQ9NZM1 2061 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 QSOX1O00391 747 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 MMP20O60882 483 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 SCO1O75880 301 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 ADH1CP00326 375 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 XPAP23025 273 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 FGF9P31371 208 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 VIPR1P32241 457 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 ATP6V1E1P36543 226 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 AGFG1P52594 562 aaKnown RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 GAS1P54826 345 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 ALDH6A1Q02252 535 aaKnown RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 MLLT1Q03111 559 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 PDGFRLQ15198 375 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 FCN2Q15485 313 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 LY6G5CQ5SRR4 150 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 BCL2L15Q5TBC7 163 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 METAP1DQ6UB28 335 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 NXPE4Q6UWF7 544 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 GET4Q7L5D6 327 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 OR8H3Q8N146 312 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 C9orf62Q8N4C0 152 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 ANKK1Q8NFD2 765 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 OR4F15Q8NGB8 312 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 RSPRY1Q96DX4 576 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 SOSTQ9BQB4 213 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 ARHGAP9Q9BRR9 750 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 CPEB1Q9BZB8 566 aaKnown RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 TAS2R7Q9NYW3 318 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 CLEC1BQ9P126 229 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 ADAM30Q9UKF2 790 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 HS3ST2Q9Y278 367 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 EXOSC1Q9Y3B2 195 aaKnown RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 WNT6Q9Y6F9 365 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 CDH10Q9Y6N8 788 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 TRAV6A0A075B6T7 132 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 A0A1B0GVC2 190 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 TRDV1A0A1B0GX56 115 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 A6NIN4 97 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 GABRPO00591 440 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 B4GALT2O60909 372 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 TYRP14679 529 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 SLC6A11P48066 632 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-203ENST00000374877 RAB8AP61006 207 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 IDNKQ5T6J7 187 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 KIAA1161Q6NSJ0 714 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 TRMT11Q7Z4G4 463 aaKnown RBP10.43□□□□□ -0.74
CCDC40-203ENST00000374877 TECPR1Q7Z6L1 1165 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 TRAM1L1Q8N609 369 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 SPERTQ8NA61 448 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 OR4M2Q8NGB6 313 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 ZNF431Q8TF32 576 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-203ENST00000374877 OR5P2Q8WZ92 322 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 CCDC120Q96HB5 630 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 IL17FQ96PD4 163 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 ZSCAN5AQ9BUG6 496 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 SAP130Q9H0E3 1048 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 MED28Q9H204 178 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 NCKAP1Q9Y2A7 1128 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 A0A1W2PRQ8 180 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 NEDD8-MDP1E9PL57 170 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 NFATC1O95644 943 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 HLA-DPB1P04440 258 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 PRKACBP22694 351 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 FCARP24071 287 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 NUDT1P36639 197 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 BUD31P41223 144 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-203ENST00000374877 SLC1A3P43003 542 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 PRLHRP49683 370 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 CDK5Q00535 292 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 DHCR24Q15392 516 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 NDUFA9Q16795 377 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 SLC27A4Q6P1M0 643 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 IKBIPQ70UQ0 350 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 KIF18BQ86Y91 864 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 TRAPPC5Q8IUR0 188 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 KLHDC8AQ8IYD2 350 aa10.43□□□□□ -0.74
CCDC40-203ENST00000374877 LRRC17Q8N6Y2 441 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms