RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 MS4A12Q9NXJ0 267 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 GLOD5A6NK44 160 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 RHPN2P1A8MT19 583 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 EFCAB9A8MZ26 197 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 FAM227AF5H4B4 570 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 M0R129 80 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 MPZL2O60487 215 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 RFPL3O75679 317 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 NR2F1P10589 423 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 CHMP24386 653 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 PPP2R1BP30154 601 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 LIPAP38571 399 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 CLK1P49759 484 aaKnown RBP14.58□□□□□ -0.08
CCDC40-202ENST00000374876 ABATP80404 500 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 SLAMF1Q13291 335 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 ITGADQ13349 1161 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 ZIC1Q15915 447 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 TMEM236Q5W0B7 351 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 TCTN3Q6NUS6 607 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 WASH2PQ6VEQ5 465 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 IGFN1Q86VF2 1251 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 KRT73Q86Y46 540 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 OR5D16Q8NGK9 328 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 ZHX1-C8orf76Q96EF9 292 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 COX4I2Q96KJ9 171 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 CCDC3Q9BQI4 270 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 SERHL2Q9H4I8 314 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 SLC6A20Q9NP91 592 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 SEMA3GQ9NS98 782 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 CPNE7Q9UBL6 633 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 KIR2DS5A0A0G2JLQ3 304 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 A0A0G2JNG1 304 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 OR5K4A6NMS3 321 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 ZAR1LA6NP61 321 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 KIR2DS3K7RE56 304 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 HAT1O14929 419 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 NUDT21O43809 227 aaKnown RBP14.57□□□□□ -0.08
CCDC40-202ENST00000374876 GUCY1B2O75343 617 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 ADAP00813 363 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 H1F0P07305 194 aaKnown RBP14.57□□□□□ -0.08
CCDC40-202ENST00000374876 STSP08842 583 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 IDUAP35475 653 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 OR1D5P58170 312 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 HHEXQ03014 270 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 ST3GAL4Q11206 333 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 KIR2DS5Q14953 304 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 RPE65Q16518 533 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 SYPL1Q16563 259 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 RGS21Q2M5E4 152 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 DCST1Q5T197 706 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 FRMPD2BQ6IN97 320 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 FAM92BQ6ZTR7 304 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 PTCHD4Q6ZW05 846 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 OR2L3Q8NG85 312 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 OR8K5Q8NH50 307 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 ZNF675Q8TD23 568 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 MS4A6EQ96DS6 147 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 UCK2Q9BZX2 261 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 EVA1BQ9NVM1 165 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 ERGIC3Q9Y282 383 aa14.57□□□□□ -0.08
CCDC40-202ENST00000374876 WASHC1A8K0Z3 465 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 AIREO43918 545 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 KDM1AO60341 852 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 OR10H3O60404 316 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 PRKRAO75569 313 aaKnown RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 ERAL1O75616 437 aaKnown RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 OXSR1O95747 527 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 HOXB3P14651 431 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 HIST1H1TP22492 207 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 ELAVL4P26378 380 aaKnown RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 KHKP50053 298 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 PRKAG1P54619 331 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 SMIM11AP58511 58 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 DCDC5Q6ZRR9 648 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 RBM45Q8IUH3 476 aaKnown RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 TRIM48Q8IWZ4 208 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 NLGN4XQ8N0W4 816 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 ACOT4Q8N9L9 421 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 B3GNT7Q8NFL0 401 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 NAT6Q93015 286 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 PPP1R14BQ96C90 147 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 AKIP1Q9NQ31 210 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 CLN6Q9NWW5 311 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 MGAT4BQ9UQ53 548 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 SH3D21A4FU49 640 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 EFCAB10A6NFE3 127 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 M0R082 166 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 FAAHO00519 579 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 DKK1O94907 266 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 OCM2P0CE71 109 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 OCMP0CE72 109 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 CMPK1P30085 196 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 AHRP35869 848 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 FASLGP48023 281 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 ANXA11P50995 505 aaKnown RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 UBE2IP63279 158 aaKnown RBP14.56□□□□□ -0.08
CCDC40-202ENST00000374876 HYAL2Q12891 473 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 ATP1A4Q13733 1029 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 TOR1AIP1Q5JTV8 583 aa14.56□□□□□ -0.08
CCDC40-202ENST00000374876 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms