RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PTPRZ1P23471 2315 aaPredicted RBP11.34□□□□□ -0.59
HMGCL-202ENST00000374487 OR6C74A6NCV1 312 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 URADA6NGE7 173 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 M0R082 166 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 CASC3O15234 703 aaKnown RBP11.34□□□□□ -0.59
HMGCL-202ENST00000374487 IGLV3-19P01714 112 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ADORA3P0DMS8 318 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF12P17014 697 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 TNNI3P19429 210 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 TLX1P31314 330 aaPredicted RBP11.34□□□□□ -0.59
HMGCL-202ENST00000374487 YPEL5P62699 121 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 FUT5Q11128 374 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ILF3Q12906 894 aaKnown RBP eCLIP11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ITGADQ13349 1161 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 DEFB134Q4QY38 66 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF311Q5JNZ3 666 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 COMTD1Q86VU5 262 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 LINC00471Q8N535 108 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ZCCHC10Q8TBK6 192 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 NT5CQ8TCD5 201 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 DYNC2LI1Q8TCX1 351 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 S100ZQ8WXG8 99 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 VMP1Q96GC9 406 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ZNF681Q96N22 645 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 OR2A14Q96R47 310 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 PINK1Q9BXM7 581 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 WDR12Q9GZL7 423 aaKnown RBP11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ARMC7Q9H6L4 198 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 CTPS2Q9NRF8 586 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 TRNAU1APQ9NX07 287 aaKnown RBP11.34□□□□□ -0.59
HMGCL-202ENST00000374487 CNOT2Q9NZN8 540 aaKnown RBP11.34□□□□□ -0.59
HMGCL-202ENST00000374487 LIPT1Q9Y234 373 aa11.34□□□□□ -0.59
HMGCL-202ENST00000374487 ANKRD33BA6NCL7 494 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 MAGEB3O15480 346 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 SEMA4FO95754 770 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 PTHP01270 115 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 IGFBP1P08833 259 aaPredicted RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 UGT2B7P16662 529 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 GPR18Q14330 331 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 LTB4RQ15722 352 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ALG11Q2TAA5 492 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ARMCX4Q5H9R4 360 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 PRAMEF8Q5VWM4 474 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 PRAMEF7Q5VXH5 474 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 LYSMD4Q5XG99 296 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 LINC00299Q6ZSB3 139 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 Q6ZSR6 202 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 LRRC25Q8N386 305 aaPredicted RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 OR4K5Q8NGD3 323 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 C9orf43Q8TAL5 461 aaPredicted RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ADAMTS15Q8TE58 950 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ACTRT3Q9BYD9 372 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 KLHL25Q9H0H3 589 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 CALML5Q9NZT1 146 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 PHF11Q9UIL8 331 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 CCDC88CQ9P219 2028 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 SPEGQ15772 3267 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 C10orf142B7Z368 130 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ASNA1O43681 348 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 B3GALT2O43825 422 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ENTPD6O75354 484 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ALPPP05187 535 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 RPLP0P05388 317 aaKnown RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 IGHV4-34P06331 123 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ZNF10P21506 573 aaPredicted RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 GADD45AP24522 165 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 TAS2R41P59536 307 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 SNRPGP62308 76 aaKnown RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 TUBA1BP68363 451 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 CHRNEQ04844 493 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 COX10Q12887 443 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 MED22Q15528 200 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 CEBPEQ15744 281 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 PLA2G2CQ5R387 149 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 C6orf132Q5T0Z8 1188 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 SLX4IPQ5VYV7 408 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 PLAG1Q6DJT9 500 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 FIGLAQ6QHK4 219 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 Q6ZNX1 250 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 TUBA1AQ71U36 451 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 SAMD14Q8IZD0 417 aaPredicted RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 CAMKVQ8NCB2 501 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 OR4K14Q8NGD5 310 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 RERGQ96A58 199 aaPredicted RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 PRRC1Q96M27 445 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 TRNT1Q96Q11 434 aaKnown RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 OR2A5Q96R48 311 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 SERINC2Q96SA4 455 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 CDCA4Q9BXL8 241 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 DCSTAMPQ9H295 470 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 TRIM45Q9H8W5 580 aaPredicted RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ZBTB20Q9HC78 741 aaPredicted RBP11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ACTR10Q9NZ32 417 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 ANKMY1Q9P2S6 941 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 PILRBQ9UKJ0 227 aa11.33□□□□□ -0.6
HMGCL-202ENST00000374487 SPAG17Q6Q759 2223 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 GVINP1Q7Z2Y8 2422 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 LOC100506127A0A0U1RQW1 187 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 A6NCN8 305 aa11.32□□□□□ -0.6
HMGCL-202ENST00000374487 DUXAA6NLW8 204 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms