RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 SPATA9Q9BWV2 254 aa13.6□□□□□ -0.23
SMPDL3B-201ENST00000373888 EQTNQ9NQ60 294 aa13.6□□□□□ -0.23
SMPDL3B-201ENST00000373888 ARMC1Q9NVT9 282 aa13.6□□□□□ -0.23
SMPDL3B-201ENST00000373888 PRODH2Q9UF12 536 aa13.6□□□□□ -0.23
SMPDL3B-201ENST00000373888 MAGEL2Q9UJ55 1249 aa13.6□□□□□ -0.23
SMPDL3B-201ENST00000373888 FAF1Q9UNN5 650 aaPredicted RBP13.6□□□□□ -0.23
SMPDL3B-201ENST00000373888 CFL2Q9Y281 166 aa13.6□□□□□ -0.23
SMPDL3B-201ENST00000373888 FAM220BPB1ANY3 271 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 HMGN4O00479 90 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 ASNA1O43681 348 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 GMNNO75496 209 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 PSMA4P25789 261 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 ANXA11P50995 505 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 CASP9P55211 416 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 ADRM1Q16186 407 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 CDC73Q6P1J9 531 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 TNFAIP8L2Q6P589 184 aaPredicted RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 RNF111Q6ZNA4 994 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 NDUFAF7Q7L592 441 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 MRGPREQ86SM8 312 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 RAB43Q86YS6 212 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 SNRNP27Q8WVK2 155 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 FGF11Q92914 225 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 VMP1Q96GC9 406 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 REXO5Q96IC2 774 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 VPS50Q96JG6 964 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 IMMP1LQ96LU5 166 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 IP6K3Q96PC2 410 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 BTBD9Q96Q07 612 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 LMF2Q9BU23 707 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 OR51I1Q9H343 314 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 FOLH1BQ9HBA9 442 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 THUMPD1Q9NXG2 353 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 GIN1Q9NXP7 522 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 RIMS3Q9UJD0 308 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 AKAP13Q12802 2813 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 DUXAA6NLW8 204 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 OR6C76A6NM76 312 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 ARPC2O15144 300 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 HNRNPRO43390 633 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 NME6O75414 186 aaPredicted RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 SOX30O94993 753 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 CAPNS1P04632 268 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 FCGR1AP12314 374 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 HOXB6P17509 224 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 HSPA13P48723 471 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 DSTNP60981 165 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 ZNF155Q12901 538 aaPredicted RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 EXT1Q16394 746 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 CYP51A1Q16850 503 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 PLAG1Q6DJT9 500 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 SLC16A11Q8NCK7 471 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 OR2T12Q8NG77 320 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 OR5D16Q8NGK9 328 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 OR7D2Q96RA2 312 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 STACQ99469 402 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 YIPF4Q9BSR8 244 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 TMEM38AQ9H6F2 299 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 DUSP22Q9NRW4 184 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 CCM2LQ9NUG4 571 aaPredicted RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 GMPR2Q9P2T1 348 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 DKK4Q9UBT3 224 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 ZNF223Q9UK11 482 aaPredicted RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 CNOT11Q9UKZ1 510 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 DTX4Q9Y2E6 619 aa13.59□□□□□ -0.23
SMPDL3B-201ENST00000373888 NSG1A0A0A6YYJ2 146 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 DHRS12A0PJE2 317 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 NKX2-2O95096 273 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 AGR2O95994 175 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 HPP00738 406 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 RPSAP08865 295 aaKnown RBP13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 NUDT7P0C024 238 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 OR12D1P0DN82 309 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 ACP2P11117 423 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 ATP6V1B2P21281 511 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 PAX7P23759 505 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 PSG6Q00889 435 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 RBBP4Q09028 425 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 MYBPC3Q14896 1274 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 EBPQ15125 230 aaKnown RBP13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 ZNHIT3Q15649 155 aaPredicted RBP13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 GRAMD1BQ3KR37 738 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 GCNT6Q5T4J0 391 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 ERICH5Q6P6B1 374 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 CYP2R1Q6VVX0 501 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 WDR53Q7Z5U6 358 aaPredicted RBP13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 VASH2Q86V25 355 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 IFNEQ86WN2 208 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 PTOV1Q86YD1 416 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 C9orf40Q8IXQ3 194 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 ZZZ3Q8IYH5 903 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 ICA1LQ8NDH6 482 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 OR8K3Q8NH51 312 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 SNIP1Q8TAD8 396 aaKnown RBP13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 FBXO30Q8TB52 745 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 M1APQ8TC57 530 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 ADAMTS15Q8TE58 950 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 SLC9A6Q92581 669 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 PIGUQ9H490 435 aa13.58□□□□□ -0.24
SMPDL3B-201ENST00000373888 PIF1Q9H611 641 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms