RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 G6PC3Q9BUM1 346 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 KCNK13Q9HB14 408 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 CREBL2O60519 120 aaPredicted RBP13.61□□□□□ -0.23
TRAF1-201ENST00000373887 GSTM4Q03013 218 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 TRAM1Q15629 374 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 TMEM35AQ53FP2 167 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 CES4AQ5XG92 561 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 RNF111Q6ZNA4 994 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 MRPL10Q7Z7H8 261 aaKnown RBP13.61□□□□□ -0.23
TRAF1-201ENST00000373887 OR8K5Q8NH50 307 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 KCNJ9Q92806 393 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 USB1Q9BQ65 265 aaKnown RBP13.61□□□□□ -0.23
TRAF1-201ENST00000373887 KCNIP1Q9NZI2 227 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 VEGFDO43915 354 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 KNG1P01042 644 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 C1GALT1C1LP0DN25 315 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 P2RY2P41231 377 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 FGL1Q08830 312 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 LYSMD4Q5XG99 296 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 FCRLBQ6BAA4 426 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 TMEFF1Q8IYR6 380 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 NDUFAF4Q9P032 175 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 IL20RAQ9UHF4 553 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 IGKV6-21A0A0C4DH24 114 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 AMY2AP04746 511 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 HOXD8P13378 290 aaPredicted RBP13.6□□□□□ -0.23
TRAF1-201ENST00000373887 STT3AP46977 705 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 FADDQ13158 208 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 UMODL1-AS1Q8N2C9 162 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 FIBINQ8TAL6 211 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 ASB15Q8WXK1 588 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 PIP5K1AQ99755 562 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 DPH2Q9BQC3 489 aaPredicted RBP13.6□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF576Q9H609 170 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 KAT6AQ92794 2004 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 CXCL12P48061 93 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 SHC2P98077 582 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 RAB11BQ15907 218 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 PGM2L1Q6PCE3 622 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 TMEM205Q6UW68 189 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 LIX1LQ8IVB5 337 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 LRIG1Q96JA1 1093 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 OR14A2Q96R54 314 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 GCM1Q9NP62 436 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 TMEM100Q9NV29 134 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 OR52A4PA6NMU1 304 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 FAAHO00519 579 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 SNAPC5O75971 98 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 STSP08842 583 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 CLCA4Q14CN2 919 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 HES5Q5TA89 166 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 NANOGP8Q6NSW7 305 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 GPR149Q86SP6 731 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 PDZD9Q8IXQ8 264 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 ALDH16A1Q8IZ83 802 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 OR52E2Q8NGJ4 325 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 OR5H2Q8NGV7 314 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 NPRL2Q8WTW4 380 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 RRNAD1Q96FB5 475 aaKnown RBP13.6□□□□□ -0.23
TRAF1-201ENST00000373887 BORCS6Q96GS4 357 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 SYNPO2LQ9H987 977 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 NANOGQ9H9S0 305 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 CCDC88AQ3V6T2 1871 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 F8W036 122 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 SPDEFO95238 335 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 SERPINA7P05543 415 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 BLOC1S1P78537 153 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 DLX2Q07687 328 aaPredicted RBP13.6□□□□□ -0.23
TRAF1-201ENST00000373887 KCNAB2Q13303 367 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 NKPD1Q17RQ9 610 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 DUS1LQ6P1R4 473 aaKnown RBP13.6□□□□□ -0.23
TRAF1-201ENST00000373887 PLXDC1Q8IUK5 500 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 HNRNPA2B1P22626 353 aaKnown RBP13.6□□□□□ -0.23
TRAF1-201ENST00000373887 GCGRP47871 477 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 GRIN2CQ14957 1233 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 EIF4HQ15056 248 aaKnown RBP13.6□□□□□ -0.23
TRAF1-201ENST00000373887 NSDHLQ15738 373 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 C1orf220Q5T0J3 134 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 FIGNL1Q6PIW4 674 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF619Q8N2I2 560 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 CDCA3Q99618 268 aaPredicted RBP13.6□□□□□ -0.23
TRAF1-201ENST00000373887 POTEKPQ9BYX7 375 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 HIF1ANQ9NWT6 349 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 ZDHHC7Q9NXF8 308 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 HCFC2Q9Y5Z7 792 aa13.6□□□□□ -0.23
TRAF1-201ENST00000373887 M0QZQ0 153 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 TP53I11O14683 189 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 AGPAT2O15120 278 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ADAM12O43184 909 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 SMAD6O43541 496 aaKnown RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 DRD1P21728 446 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 DIO3P55073 304 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ERVFC1P60507 584 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 CDKN3Q16667 212 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 PXKQ7Z7A4 578 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 CDC6Q99741 560 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF334Q9HCZ1 680 aaPredicted RBP13.59□□□□□ -0.23
TRAF1-201ENST00000373887 OARD1Q9Y530 152 aa13.59□□□□□ -0.23
TRAF1-201ENST00000373887 THBS2P35442 1172 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms