RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 GIMAP5Q96F15 307 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 ITCHQ96J02 903 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 LMF2Q9BU23 707 aaKnown RBP16.89■□□□□ 0.29
PBX3-202ENST00000373482 FAM107BQ9H098 131 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 FAM53CQ9NYF3 392 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 MRTO4Q9UKD2 239 aaKnown RBP16.89■□□□□ 0.29
PBX3-202ENST00000373482 VPS4AQ9UN37 437 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 PCDHGA10Q9Y5H3 936 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 SHANK1Q9Y566 2161 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 SVILO95425 2214 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 RNF103-CHMP3A0A140T963 221 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 KLRC4-KLRK1H3BQV0 150 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 NR5A2O00482 541 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 RFXANKO14593 260 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 SUV39H1O43463 412 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 NME2P1O60361 137 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 REM1O75628 298 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 PPM1BO75688 479 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 C1QL1O75973 258 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 SOX30O94993 753 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 RASAL1O95294 804 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 ALOX5P09917 674 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 NME2P22392 152 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 IL12BP29460 328 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 PSMD4P55036 377 aaKnown RBP16.88■□□□□ 0.29
PBX3-202ENST00000373482 RCAN2Q14206 197 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 LASP1Q14847 261 aaKnown RBP16.88■□□□□ 0.29
PBX3-202ENST00000373482 CYP27C1Q4G0S4 372 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 SLC22A10Q63ZE4 541 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 BLOC1S3Q6QNY0 202 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 NPSR1Q6W5P4 371 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 PRICKLE2Q7Z3G6 844 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 MDGA2Q7Z553 956 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 SPATA21Q7Z572 469 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 OR5M3Q8NGP4 307 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 GOT1L1Q8NHS2 421 aaPredicted RBP16.88■□□□□ 0.29
PBX3-202ENST00000373482 GPR151Q8TDV0 419 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 VPS33AQ96AX1 596 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 SPDL1Q96EA4 605 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 ELAC2Q9BQ52 826 aaKnown RBP16.88■□□□□ 0.29
PBX3-202ENST00000373482 ACTRT3Q9BYD9 372 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 HES7Q9BYE0 225 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 ZNF385DQ9H6B1 395 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 SACM1LQ9NTJ5 587 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 CBLCQ9ULV8 474 aa16.88■□□□□ 0.29
PBX3-202ENST00000373482 GTF3C1Q12789 2109 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 ABCB7O75027 752 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 NKX2-2O95096 273 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 KCNH1O95259 989 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 GABRA3P34903 492 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 CHI3L1P36222 383 aaPredicted RBP16.87■□□□□ 0.29
PBX3-202ENST00000373482 FBXW4P57775 412 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 MRPS22P82650 360 aaKnown RBP16.87■□□□□ 0.29
PBX3-202ENST00000373482 DECR1Q16698 335 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 CDC73Q6P1J9 531 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 ZNF621Q6ZSS3 439 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 NUP54Q7Z3B4 507 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 C6orf120Q7Z4R8 191 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 WDR53Q7Z5U6 358 aaPredicted RBP16.87■□□□□ 0.29
PBX3-202ENST00000373482 FUNDC1Q8IVP5 155 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 CPSF7Q8N684 471 aaKnown RBP16.87■□□□□ 0.29
PBX3-202ENST00000373482 ADAMTS15Q8TE58 950 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 PAQR8Q8TEZ7 354 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 HOXB13Q92826 284 aaPredicted RBP16.87■□□□□ 0.29
PBX3-202ENST00000373482 TMBIM1Q969X1 311 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 SLC35G5Q96KT7 338 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 SLC35A5Q9BS91 424 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 YIPF4Q9BSR8 244 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 GIN1Q9NXP7 522 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 CNIH4Q9P003 139 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 MAP10Q9P2G4 905 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 PCDHGB3Q9Y5G1 929 aa16.87■□□□□ 0.29
PBX3-202ENST00000373482 PCNX3Q9H6A9 2034 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 OR6C70A6NIJ9 312 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 ACP2P11117 423 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 DRD4P21917 467 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 MATN1P21941 496 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 MAP3K8P41279 467 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 PNLIPRP2P54317 469 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 GAB1Q13480 694 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 EFR3AQ14156 821 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 C6orf10Q5SRN2 563 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 FAM180AQ6UWF9 173 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 ANGPTL8Q6UXH0 198 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 SLC16A11Q8NCK7 471 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 OR10G3Q8NGC4 313 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 OR4N2Q8NGD1 307 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 FBXO30Q8TB52 745 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 TMCO6Q96DC7 493 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 C16orf58Q96GQ5 468 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 COL21A1Q96P44 957 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 SECISBP2Q96T21 854 aaKnown RBP16.86■□□□□ 0.29
PBX3-202ENST00000373482 STACQ99469 402 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 INPP5KQ9BT40 448 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 TRIM4Q9C037 500 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 PIGUQ9H490 435 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 DUSP22Q9NRW4 184 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 GPATCH2Q9NW75 528 aa16.86■□□□□ 0.29
PBX3-202ENST00000373482 DUXAA6NLW8 204 aa16.85■□□□□ 0.29
PBX3-202ENST00000373482 PEX1O43933 1283 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms