RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 NNMTP40261 264 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 EFNB1P98172 346 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 SLC36A4Q6YBV0 504 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 CFAP206Q8IYR0 622 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 FBXL6Q8N531 539 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 TRAM1L1Q8N609 369 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 ARIH2OSQ8N7S6 290 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 OR11H7Q8NGC8 314 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 AP2M1Q96CW1 435 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 YIPF4Q9BSR8 244 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 QRSL1Q9H0R6 528 aaKnown RBP13.93□□□□□ -0.18
COL9A2-202ENST00000372748 CDCP1Q9H5V8 836 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 TRPC4Q9UBN4 977 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 HCFC2Q9Y5Z7 792 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 KIAA1671Q9BY89 1806 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 PTNP21246 168 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 SLC6A1P30531 599 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 SSTR2P30874 369 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 METAP1P53582 386 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 COL9A2Q14055 689 aaPredicted RBP13.93□□□□□ -0.18
COL9A2-202ENST00000372748 TEAD2Q15562 447 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 RNASE12Q5GAN4 147 aaKnown RBP13.93□□□□□ -0.18
COL9A2-202ENST00000372748 CNKSR3Q6P9H4 555 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 METAP1DQ6UB28 335 aaPredicted RBP13.93□□□□□ -0.18
COL9A2-202ENST00000372748 WASH2PQ6VEQ5 465 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 LRRC17Q8N6Y2 441 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 KREMEN2Q8NCW0 462 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 SLC5A11Q8WWX8 675 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 IRF7Q92985 503 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 GLYATL1Q969I3 302 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 MSANTD3Q96H12 275 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF607Q96SK3 696 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 FGF20Q9NP95 211 aaPredicted RBP13.93□□□□□ -0.18
COL9A2-202ENST00000372748 EIF3KQ9UBQ5 218 aaKnown RBP13.93□□□□□ -0.18
COL9A2-202ENST00000372748 ACAD8Q9UKU7 415 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 PLAGL1Q9UM63 463 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 ING4Q9UNL4 249 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 A0A1W2PRQ8 180 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 FKTNO75072 461 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 LAG3P18627 525 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 CXCL3P19876 107 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 CNTN1Q12860 1018 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 FGFBP1Q14512 234 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 ARHGEF6Q15052 776 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 SLC30A6Q6NXT4 461 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 SLC27A4Q6P1M0 643 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 MZT2AQ6P582 158 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 TMEM91Q6ZNR0 172 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 KLBQ86Z14 1044 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF655Q8N720 491 aaPredicted RBP13.93□□□□□ -0.18
COL9A2-202ENST00000372748 TEX47Q8TBZ9 253 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 THAP7Q9BT49 309 aaPredicted RBP13.93□□□□□ -0.18
COL9A2-202ENST00000372748 ZFP64Q9NPA5 681 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 TAS2R7Q9NYW3 318 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 ELF5Q9UKW6 265 aaPredicted RBP13.93□□□□□ -0.18
COL9A2-202ENST00000372748 WNT6Q9Y6F9 365 aa13.93□□□□□ -0.18
COL9A2-202ENST00000372748 FRS3O43559 492 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 MMP20O60882 483 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 LILRB3O75022 631 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 HLA-DPB1P04440 258 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 NR2F1P10589 423 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 ATP6V1E1P36543 226 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 BUD31P41223 144 aaPredicted RBP13.92□□□□□ -0.18
COL9A2-202ENST00000372748 CDH11P55287 796 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 SMIM11AP58511 58 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 TAP2Q03519 686 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 COX10Q12887 443 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF267Q14586 743 aaPredicted RBP13.92□□□□□ -0.18
COL9A2-202ENST00000372748 SLC25A30Q5SVS4 291 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 GHDCQ8N2G8 530 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF485Q8NCK3 441 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 MORN4Q8NDC4 146 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 SPRYD4Q8WW59 207 aaPredicted RBP13.92□□□□□ -0.18
COL9A2-202ENST00000372748 SMG7Q92540 1137 aaKnown RBP13.92□□□□□ -0.18
COL9A2-202ENST00000372748 F2RL3Q96RI0 385 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 ZSCAN5AQ9BUG6 496 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 PIGUQ9H490 435 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 ZFR2Q9UPR6 939 aaKnown RBP13.92□□□□□ -0.18
COL9A2-202ENST00000372748 A0A0C4DFX4 3053 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 LOC105369274A0A096LPK9 316 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 A0A0G2JN53 185 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 A8MUA0 341 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 PLPP1O14494 284 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 PDPK1O15530 556 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 EEF1E1O43324 174 aaKnown RBP13.92□□□□□ -0.18
COL9A2-202ENST00000372748 FGF18O76093 207 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 CXCL14O95715 111 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 ELFN1P0C7U0 828 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 PRKAG1P54619 331 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 ATP12AP54707 1039 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 NXPE4Q6UWF7 544 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 OR4N4Q8N0Y3 316 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 TBC1D19Q8N5T2 526 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 LSMEM1Q8N8F7 131 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 BBS1Q8NFJ9 593 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 GPR137Q96N19 417 aa13.92□□□□□ -0.18
COL9A2-202ENST00000372748 SMAD5Q99717 465 aaKnown RBP13.92□□□□□ -0.18
COL9A2-202ENST00000372748 DPCDQ9BVM2 203 aaPredicted RBP13.92□□□□□ -0.18
COL9A2-202ENST00000372748 IMP3Q9NV31 184 aaKnown RBP13.92□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF624Q9P2J8 865 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms