RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 FBXW8Q8N3Y1 598 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 CPSF7Q8N684 471 aaKnown RBP13.66□□□□□ -0.22
COL9A1-204ENST00000370496 CDRT4Q8N9R6 151 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 SLC9A6Q92581 669 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 FRMD6Q96NE9 622 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 TAAR6Q96RI8 345 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 LMF2Q9BU23 707 aaKnown RBP13.66□□□□□ -0.22
COL9A1-204ENST00000370496 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 A0A0G2JMM0 328 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 A0A1W2PPB8 328 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 A0A1W2PRS3 328 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 TTC36A6NLP5 189 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 KIR3DP1A8MWS1 328 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 REM1O75628 298 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 IL6P05231 212 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 KRT16P08779 473 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 PLA2G2AP14555 144 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 ZNF24P17028 368 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 NCF2P19878 526 aaPredicted RBP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 RFX3P48380 749 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 POLR2JP52435 117 aaKnown RBP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 KCNJ2P63252 427 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 IRX1P78414 480 aaPredicted RBP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 PSG6Q00889 435 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 LRRC74AQ0VAA2 488 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 SF3A3Q12874 501 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 LASP1Q14847 261 aaKnown RBP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 DECR1Q16698 335 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 SLC22A10Q63ZE4 541 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 DNAJC14Q6Y2X3 702 aaPredicted RBP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 ATCAYQ86WG3 371 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 SULF2Q8IWU5 870 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 COX18Q8N8Q8 333 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 POGLUT1Q8NBL1 392 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 OR2M7Q8NG81 312 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 GPR151Q8TDV0 419 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 PAQR8Q8TEZ7 354 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 DIO2Q92813 273 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 EFHD2Q96C19 240 aaPredicted RBP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 GIMAP5Q96F15 307 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 OTUB1Q96FW1 271 aaPredicted RBP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 SLC35G5Q96KT7 338 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 PANX1Q96RD7 426 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 YIPF4Q9BSR8 244 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 RMND5AQ9H871 391 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 METTL7AQ9H8H3 244 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 CNIH4Q9P003 139 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 NTMQ9P121 344 aa13.65□□□□□ -0.22
COL9A1-204ENST00000370496 MRTO4Q9UKD2 239 aaKnown RBP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 FAF1Q9UNN5 650 aaPredicted RBP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 CHCHD2Q9Y6H1 151 aaPredicted RBP13.65□□□□□ -0.22
COL9A1-204ENST00000370496 FAM234BA2RU67 622 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 ASPDHA6ND91 283 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 ACOT7O00154 380 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 NR5A2O00482 541 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 KCNH1O95259 989 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 HMGN2P05204 90 aaKnown RBP13.64□□□□□ -0.23
COL9A1-204ENST00000370496 ALOX5P09917 674 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 ACP2P11117 423 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 NAGAP17050 411 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 GABRA3P34903 492 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 CHI3L1P36222 383 aaPredicted RBP13.64□□□□□ -0.23
COL9A1-204ENST00000370496 RFC3P40938 356 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 DNASE1L1P49184 302 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 ATP4BP51164 291 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 ARFIP2P53365 341 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 KCNK10P57789 538 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 PHC1P78364 1004 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 MRPS22P82650 360 aaKnown RBP13.64□□□□□ -0.23
COL9A1-204ENST00000370496 PLGLB1Q02325 96 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 GAB1Q13480 694 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 CYP27C1Q4G0S4 372 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 TBCELQ5QJ74 424 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 ANGPTL8Q6UXH0 198 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 TRIML2Q8N7C3 387 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 OR4N2Q8NGD1 307 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 SPPL2AQ8TCT8 520 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 FAR1Q8WVX9 515 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 MIB2Q96AX9 1013 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 RMND5BQ96G75 393 aaPredicted RBP13.64□□□□□ -0.23
COL9A1-204ENST00000370496 CCDC115Q96NT0 180 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 COL21A1Q96P44 957 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 ADOQ96SZ5 270 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 FAM173AQ9BQD7 235 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 DOHHQ9BU89 302 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 SH2D2AQ9NP31 389 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 DEPPQ9NTK1 212 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 KLRF1Q9NZS2 232 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 BTNL2Q9UIR0 455 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 CBLCQ9ULV8 474 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 VPS4AQ9UN37 437 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 EML6Q6ZMW3 1958 aa13.64□□□□□ -0.23
COL9A1-204ENST00000370496 SHANK1Q9Y566 2161 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 OR6C70A6NIJ9 312 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 TFECO14948 347 aaPredicted RBP13.63□□□□□ -0.23
COL9A1-204ENST00000370496 HS6ST1O60243 411 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 SCN2BO60939 215 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 UGT2B11O75310 529 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 PIGAP37287 484 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms