RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 ISXQ2M1V0 245 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 EXOC3L2Q2M3D2 409 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 SPARTQ8N0X7 666 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 METTL27Q8N6F8 245 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-203ENST00000369747 BMPERQ8N8U9 685 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 GPR32P1Q8NGA4 272 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 OR10G2Q8NGC3 310 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 OR5T3Q8NGG3 340 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 ISOC1Q96CN7 298 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 FEVQ99581 238 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 PITX2Q99697 317 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 PIP5K1AQ99755 562 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 CTRCQ99895 268 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 GABARAPL3Q9BY60 117 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 FANCEQ9HB96 536 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 ENAMQ9NRM1 1142 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 ZCCHC3Q9NUD5 404 aaKnown RBP16.19■□□□□ 0.18
UBE3D-203ENST00000369747 ACER3Q9NUN7 267 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 PAK1IP1Q9NWT1 392 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-203ENST00000369747 DHCR7Q9UBM7 475 aaKnown RBP16.19■□□□□ 0.18
UBE3D-203ENST00000369747 CDC14AQ9UNH5 594 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 SCN2AQ99250 2005 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 FREM2Q5SZK8 3169 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 ZNF749O43361 778 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 CCDC159P0C7I6 412 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 OR12D1P0DN82 309 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 FUT4P22083 530 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 LIMS1P48059 325 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 SH3BGRP55822 239 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-203ENST00000369747 PIGFQ07326 219 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 HES3Q5TGS1 186 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 TMEM64Q6YI46 380 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 TTLL10Q6ZVT0 673 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 SZRD1Q7Z422 152 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 CCDC71Q8IV32 467 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-203ENST00000369747 CCDC116Q8IYX3 515 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 SLC5A8Q8N695 610 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 BPIFB6Q8NFQ5 453 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 OR5D16Q8NGK9 328 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 TUBA1CQ9BQE3 449 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 RLIMQ9NVW2 624 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 LYARQ9NX58 379 aaKnown RBP16.18■□□□□ 0.18
UBE3D-203ENST00000369747 AASSQ9UDR5 926 aa16.18■□□□□ 0.18
UBE3D-203ENST00000369747 ZNF701M0R085 212 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 TRMUO75648 421 aaKnown RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 DKK1O94907 266 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 ANGPTL1O95841 491 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 MT-CO3P00414 261 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 C8orf89P0DMQ9 161 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 RHCEP18577 417 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 CSRP1P21291 193 aaKnown RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 GCGRP47871 477 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 HMGA2P52926 109 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 RPP38P78345 283 aaKnown RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 KCNC4Q03721 635 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 RUNX2Q13950 521 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 SYPL1Q16563 259 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 MICAQ29983 383 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 PWWP2BQ6NUJ5 590 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 TSPYL5Q86VY4 417 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 SFXN5Q8TD22 340 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 PMEPA1Q969W9 287 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 MAGED4Q96JG8 741 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 APOL4Q9BPW4 351 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 LIN28AQ9H9Z2 209 aaKnown RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 ANKHQ9HCJ1 492 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 CUTCQ9NTM9 273 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 P2RX2Q9UBL9 471 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 TMEM184BQ9Y519 407 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 PMS2P1A4D2B8 440 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 SLC28A2O43868 658 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 XPNPEP2O43895 674 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 CSO75390 466 aaKnown RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 RDH16O75452 317 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 PDE9AO76083 593 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 IFNW1P05000 195 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 MATN1P21941 496 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 ALAS2P22557 587 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 DCKP27707 260 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 FMO3P31513 532 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 FEN1P39748 380 aaKnown RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 FAM53BQ14153 422 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 GANABQ14697 944 aaKnown RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 CEBPEQ15744 281 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 GARNL3Q5VVW2 1013 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 LGI4Q8N135 537 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 SLC38A9Q8NBW4 561 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 OR13F1Q8NGS4 319 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 XAGE5Q8WWM1 108 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 HRASLS5Q96KN8 279 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 ZNF681Q96N22 645 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 SERINC2Q96SA4 455 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 CMKLR1Q99788 373 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 TREX2Q9BQ50 279 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-203ENST00000369747 SEMA3GQ9NS98 782 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 RARRES3Q9UL19 164 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 ENTPD4Q9Y227 616 aa16.17■□□□□ 0.18
UBE3D-203ENST00000369747 PCDH17O14917 1159 aa16.16■□□□□ 0.18
UBE3D-203ENST00000369747 B3GALT2O43825 422 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms