RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 MRPS33Q9Y291 106 aaKnown RBP8.21□□□□□ -1.1
SNX27-201ENST00000368838 KLHL20Q9Y2M5 609 aa8.21□□□□□ -1.1
SNX27-201ENST00000368838 MMACHCQ9Y4U1 282 aa8.21□□□□□ -1.1
SNX27-201ENST00000368838 ZNF780BQ9Y6R6 833 aa8.21□□□□□ -1.1
SNX27-201ENST00000368838 CNTRLQ7Z7A1 2325 aa8.21□□□□□ -1.1
SNX27-201ENST00000368838 SCN2AQ99250 2005 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 DIDO1Q9BTC0 2240 aaKnown RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 IGLV3-12A0A075B6K2 115 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 HYKKA2RU49 373 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 A6NL46 340 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 DUXAA6NLW8 204 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 TTLL8A6PVC2 850 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 ZNF749O43361 778 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 EMC8O43402 210 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 CTNSO60931 367 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 SH3BGRLO75368 114 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 PDE9AO76083 593 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 CPSF4O95639 269 aaKnown RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 IFNA14P01570 189 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 SEMG1P04279 462 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 SERPIND1P05546 499 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 HBQ1P09105 142 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 SLC35E2P0CK97 266 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 RAP2AP10114 183 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 ARAFP10398 606 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 RNH1P13489 461 aaKnown RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 CPMP14384 443 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 GNLYP22749 145 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 CPN2P22792 545 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 KDELR2P33947 212 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 MAP3K8P41279 467 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 AVPR1BP47901 424 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 CCT3P49368 545 aaKnown RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 VSX2P58304 361 aaPredicted RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 MAP4K2Q12851 820 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 RAPSNQ13702 412 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 PRR30Q53SZ7 412 aaPredicted RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 WLSQ5T9L3 541 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 OGFRL1Q5TC84 451 aaPredicted RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 ANKRD26P1Q6NSI1 321 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 LRRC74BQ6ZQY2 392 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 CBLL1Q75N03 491 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 EIF3MQ7L2H7 374 aaKnown RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 PATL1Q86TB9 770 aaKnown RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 SPATA24Q86W54 205 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 LGI4Q8N135 537 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 OR2L13Q8N349 312 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 LRRC25Q8N386 305 aaPredicted RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 ANKFN1Q8N957 763 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 TTC29Q8NA56 475 aaPredicted RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 FAM156AQ8NDB6 213 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 CANT1Q8WVQ1 401 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 RASSF5Q8WWW0 418 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 ZNF501Q96CX3 271 aaPredicted RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 ELP4Q96EB1 424 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 C3orf14Q9HBI5 128 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 AGPAT4Q9NRZ5 378 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 ZNF639Q9UID6 485 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 SERTAD3Q9UJW9 196 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 KCND3Q9UK17 655 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 C19orf53Q9UNZ5 99 aaPredicted RBP8.2□□□□□ -1.1
SNX27-201ENST00000368838 LIPT1Q9Y234 373 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 TEX15Q9BXT5 2789 aa8.2□□□□□ -1.1
SNX27-201ENST00000368838 CENPEQ02224 2701 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 CLDN4O14493 209 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 PGRMC2O15173 223 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 HCRTR1O43613 425 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 GSNP06396 782 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 TFPTP0C1Z6 253 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 ETS2P15036 469 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 PORP16435 677 aaPredicted RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 TCN1P20061 433 aaPredicted RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 FASP25445 335 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 MAN2A2P49641 1150 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 XKP51811 444 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 ITGA1P56199 1179 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 RPS15P62841 145 aaKnown RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 PSPHP78330 225 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 MRPS22P82650 360 aaKnown RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 CHRNB3Q05901 458 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 SERTAD2Q14140 314 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 ATP6AP1Q15904 470 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 CYP51A1Q16850 503 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 FAM98BQ52LJ0 330 aaKnown RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 C18orf63Q68DL7 685 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 HEPHL1Q6MZM0 1159 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 RHBDD2Q6NTF9 364 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 TCTN3Q6NUS6 607 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 C6orf120Q7Z4R8 191 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 SPPL2CQ8IUH8 684 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 ZC3H7AQ8IWR0 971 aaKnown RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 ST13P4Q8IZP2 240 aaPredicted RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 C10orf111Q8N326 155 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 HIPK4Q8NE63 616 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 PYDC1Q8WXC3 89 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 CIDECQ96AQ7 238 aaPredicted RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 CLIP3Q96DZ5 547 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 NRBF2Q96F24 287 aa8.19□□□□□ -1.1
SNX27-201ENST00000368838 AURKBQ96GD4 344 aaPredicted RBP8.19□□□□□ -1.1
SNX27-201ENST00000368838 CENPNQ96H22 339 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms